LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo3g03300	ATGGTCACCACCACTACCAAGCCTCCTTCTAATATCTGTTTCCTCCTTCTGTTGCTTCTAGCACACTTTAATCTGGGCAAAAGCCAACTTGAGCTGAATTACTACTCTAAAAGTTGCCCAAAAGCTGAAGAGATCATCAAGGAACAAGTCACACAACTATATAACAAGCATGGAAACACTGCCGTTTCGTGGGTCAGAAATCTCTTCCACGATTGTGTGGTTAAGTCATGCGATGCATCACTACTGTTAGAGACGGTGCCGAATGGTGTAGTGTCGGAGCAGACGTCGGAGAGAAGTTTTGGGATGAGAAACTTCAAGTACGTAAACACCATCAAAGCAGCCGTTGAGAAAGAATGCCCCTTCACAGTCTCATGCGCTGACATTGTTGCTCTTTCTGCTAGAGATGGCATTGCCTTGTTGGGAGGACCAAGCATTGAAATGAAGACAGGGCGAAAGGATAGCAAAGAAAGCTATGTGACGGCGGTGGAAGACTTGATTCCAAACCACAATGATTCAATGTCCTTAGTGCTGTCTCGTTTTCAAGCCATTGGCATTGACGTTGAAGCCACAGTCGCTCTTTTAGGTGCTCACTCAGTTGGAAGAGTTCACTGCAAGAATCTGGTGCAGAGATTATACCCCACTGTGGACTCATCACTGGACCCTGCACACGCCGAGTACCTGAAACGACGGTGCCCAACACCCAATCCCGATCCAAAGGCTGTTCTGTATTCGAGGAACGACCTGAAAACTCCCATGATCATCGACAACAACTACTACAAGAACATCTTGCAACACAAGGGGCTCCTCACTGTGGATGAAGAGCTTGCCACTGACCCAAGAACCGCACCCTATGTCCAAAAGATGGCCGACGACAATGAGTATTTCAACCAACAGTTCTCAAGGGCCATTCTCTTGTTATCGGAGACAAATCCTTTAACAGGAGATCAAGGAGAAATCAGAAAGGATTGTCGCTACCTCAATGCCAATTAG	990	0.4667	MVTTTTKPPSNICFLLLLLLAHFNLGKSQLELNYYSKSCPKAEEIIKEQVTQLYNKHGNTAVSWVRNLFHDCVVKSCDASLLLETVPNGVVSEQTSERSFGMRNFKYVNTIKAAVEKECPFTVSCADIVALSARDGIALLGGPSIEMKTGRKDSKESYVTAVEDLIPNHNDSMSLVLSRFQAIGIDVEATVALLGAHSVGRVHCKNLVQRLYPTVDSSLDPAHAEYLKRRCPTPNPDPKAVLYSRNDLKTPMIIDNNYYKNILQHKGLLTVDEELATDPRTAPYVQKMADDNEYFNQQFSRAILLLSETNPLTGDQGEIRKDCRYLNAN	329

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo3g03300	329	PANTHER	-	14	327	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Pumo3g03300	329	FunFam	Peroxidase	33	174	-	-
	Pumo3g03300	329	PRINTS	Plant peroxidase signature	301	314	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Pumo3g03300	329	PRINTS	Plant peroxidase signature	63	83	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Pumo3g03300	329	PRINTS	Plant peroxidase signature	39	58	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Pumo3g03300	329	PRINTS	Plant peroxidase signature	122	132	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Pumo3g03300	329	PRINTS	Plant peroxidase signature	188	200	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Pumo3g03300	329	PRINTS	Plant peroxidase signature	245	260	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Pumo3g03300	329	PRINTS	Plant peroxidase signature	261	278	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Pumo3g03300	329	PRINTS	Plant peroxidase signature	103	116	IPR000823	GO:0004601\|GO:0006979\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo3g03300	Pumo-Chr3	60694965	60698604	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo3g03300	32	327	Peroxidase	AT2G37130	76.431	1.48e-173	481

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo3g03300	K00430		-	gmx:100785485	602.823

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