Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03300 ATGGTCACCACCACTACCAAGCCTCCTTCTAATATCTGTTTCCTCCTTCTGTTGCTTCTAGCACACTTTAATCTGGGCAAAAGCCAACTTGAGCTGAATTACTACTCTAAAAGTTGCCCAAAAGCTGAAGAGATCATCAAGGAACAAGTCACACAACTATATAACAAGCATGGAAACACTGCCGTTTCGTGGGTCAGAAATCTCTTCCACGATTGTGTGGTTAAGTCATGCGATGCATCACTACTGTTAGAGACGGTGCCGAATGGTGTAGTGTCGGAGCAGACGTCGGAGAGAAGTTTTGGGATGAGAAACTTCAAGTACGTAAACACCATCAAAGCAGCCGTTGAGAAAGAATGCCCCTTCACAGTCTCATGCGCTGACATTGTTGCTCTTTCTGCTAGAGATGGCATTGCCTTGTTGGGAGGACCAAGCATTGAAATGAAGACAGGGCGAAAGGATAGCAAAGAAAGCTATGTGACGGCGGTGGAAGACTTGATTCCAAACCACAATGATTCAATGTCCTTAGTGCTGTCTCGTTTTCAAGCCATTGGCATTGACGTTGAAGCCACAGTCGCTCTTTTAGGTGCTCACTCAGTTGGAAGAGTTCACTGCAAGAATCTGGTGCAGAGATTATACCCCACTGTGGACTCATCACTGGACCCTGCACACGCCGAGTACCTGAAACGACGGTGCCCAACACCCAATCCCGATCCAAAGGCTGTTCTGTATTCGAGGAACGACCTGAAAACTCCCATGATCATCGACAACAACTACTACAAGAACATCTTGCAACACAAGGGGCTCCTCACTGTGGATGAAGAGCTTGCCACTGACCCAAGAACCGCACCCTATGTCCAAAAGATGGCCGACGACAATGAGTATTTCAACCAACAGTTCTCAAGGGCCATTCTCTTGTTATCGGAGACAAATCCTTTAACAGGAGATCAAGGAGAAATCAGAAAGGATTGTCGCTACCTCAATGCCAATTAG 990 0.4667 MVTTTTKPPSNICFLLLLLLAHFNLGKSQLELNYYSKSCPKAEEIIKEQVTQLYNKHGNTAVSWVRNLFHDCVVKSCDASLLLETVPNGVVSEQTSERSFGMRNFKYVNTIKAAVEKECPFTVSCADIVALSARDGIALLGGPSIEMKTGRKDSKESYVTAVEDLIPNHNDSMSLVLSRFQAIGIDVEATVALLGAHSVGRVHCKNLVQRLYPTVDSSLDPAHAEYLKRRCPTPNPDPKAVLYSRNDLKTPMIIDNNYYKNILQHKGLLTVDEELATDPRTAPYVQKMADDNEYFNQQFSRAILLLSETNPLTGDQGEIRKDCRYLNAN 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03300 329 PANTHER - 14 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g03300 329 FunFam Peroxidase 33 174 - -
Pumo3g03300 329 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g03300 329 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g03300 329 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g03300 329 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g03300 329 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g03300 329 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g03300 329 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g03300 329 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g03300 329 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g03300 329 CDD secretory_peroxidase 29 324 IPR033905 GO:0004601|GO:0042744
Pumo3g03300 329 Gene3D - 33 327 - -
Pumo3g03300 329 Gene3D Peroxidase, domain 2 167 306 - -
Pumo3g03300 329 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo3g03300 329 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo3g03300 329 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo3g03300 329 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo3g03300 329 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo3g03300 329 ProSiteProfiles Plant heme peroxidase family profile. 29 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo3g03300 329 FunFam Peroxidase 167 306 - -
Pumo3g03300 329 Pfam Peroxidase 47 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo3g03300 329 SUPERFAMILY Heme-dependent peroxidases 29 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03300 Pumo-Chr3 60694965 60698604 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03300 32 327 Peroxidase AT2G37130 76.431 1.48e-173 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03300 K00430 - gmx:100785485 602.823