Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03266 ATGTCACAAAATTCTGAGGAGATAAAGGCACTTGAGCAGTGGAGATGGTCTGAAATGCAGGGCCTTGAGCTTGTGTCTTCTTCTGCTCCGGTTTCTGACTCGCATGAATCCAACCCAACAACATTGGAAGAAGAAAGGGTAATGGAGGAGGCTTCAGTGGCCAAGAAAGATGGTGTTCCTAATGGTACTTGTGGTGGTGGAAGCACTTCTAGTGGTGGGGAGAAGAAGGGTGAGAGTGTTTTTGCTTCTGTTGGGTTTGGTGAGCTTTTCAGATTTTCTGATGGTTTAGATTACATTCTAATGGCAATTGGAACGGTTGGAGCATTTGTACATGGCTGCTCCTTGCCACTCTTTCTTCGGTTCTTTGCTGATCTCGTGAATTCCTTTGGTTCCAATGCAAATAACTTGGACAAGATGACTCAGGAAGTGGTGAAGTATGCGTTTTACTTCCTGGTGGTGGGGGCTGCCATATGGGTATCTTCCTGGGCAGAGATTTCTTGCTGGATGTGGACAGGTGAACGGCAATCAACGAGGATGAGGATCAGGTATTTGGAAGCAGCGTTGGACCAGGACATTCAATTCTTTGACACGGAGGTTCGAACATCAGATGTTGTTTTTGCCATTAACACTGATGCTGTTATGGTTCAAGATGCCATTAGCGAGAAGTTGGGTAATTTCATTCACTACATGGCTACATTTGTTTCTGGATTTGTTGTGGGTTTCACTGCGGTTTGGCAATTGGCACTGGTTACCCTCGCTGTGGTCCCTATAATAGCAGTGATCGGAGGCATTCACACCACCACTTTGGCCAAGCTATCTAGTAAAAGCCAGGAGGCTCTTTCTCAAGCTGGTAACATTGTGGAACAGACTGTTGTTCAAATTCGAGTGGTGTTGGCGTTTGTTGGGGAGACTAGAGCACTGCAGGGCTATTCCTCTGCGTTGAGGATTGCACAGAAGATTGGGTACAAGACTGGATTTGCAAAGGGAATAGGATTGGGGGCCACTTACTTTGTTGTTTTCTGTTGCTATGCTCTTTTGCTTTGGTATGGAGGCTATTTGGTGAGGCACCACTACACCAATGGAGGACTTGCCTATTGCCACTATGTTTTCTGTTATGATTGGTGGATTGGCTTTAGGCCAGTCTGCACCTAG 1152 0.4618 MSQNSEEIKALEQWRWSEMQGLELVSSSAPVSDSHESNPTTLEEERVMEEASVAKKDGVPNGTCGGGSTSSGGEKKGESVFASVGFGELFRFSDGLDYILMAIGTVGAFVHGCSLPLFLRFFADLVNSFGSNANNLDKMTQEVVKYAFYFLVVGAAIWVSSWAEISCWMWTGERQSTRMRIRYLEAALDQDIQFFDTEVRTSDVVFAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPIIAVIGGIHTTTLAKLSSKSQEALSQAGNIVEQTVVQIRVVLAFVGETRALQGYSSALRIAQKIGYKTGFAKGIGLGATYFVVFCCYALLLWYGGYLVRHHYTNGGLAYCHYVFCYDWWIGFRPVCT 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03266 383 Pfam ABC transporter transmembrane region 101 362 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pumo3g03266 383 Gene3D ABC transporter type 1, transmembrane domain 97 368 IPR036640 GO:0005524|GO:0016020
Pumo3g03266 383 MobiDBLite consensus disorder prediction 25 76 - -
Pumo3g03266 383 SUPERFAMILY ABC transporter transmembrane region 89 363 IPR036640 GO:0005524|GO:0016020
Pumo3g03266 383 FunFam ABC transporter B family member 1 88 371 - -
Pumo3g03266 383 MobiDBLite consensus disorder prediction 38 53 - -
Pumo3g03266 383 PANTHER ABC TRANSPORTER B FAMILY 70 363 IPR039421 -
Pumo3g03266 383 CDD ABC_6TM_Pgp_ABCB1_D1_like 101 362 - -
Pumo3g03266 383 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 102 362 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03266 Pumo-Chr3 60195503 60197335 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03266 74 364 Calmodulin-binding Proteins AT2G36910 85.567 7.61e-180 532