Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03265 ATGGCTGCATTTACAAAGGCCAGAGTTGCTGCTGCAAAGATTTTTCGAGTGATAGATCACAAGCCGGGTATAGACAGAAAGAGTGAATCAGGTTTGGAGTTAGAGAGTGTTACAGGACTAGTGGAGCTGAGAAATGTGGACTTTTCATACCCCTCAAGGCCAGAGGTTATGATCCTTAACAATTTCTCCTTGAGTGTGCCTGCTGGCAAGACCATTGCTTTGGTTGGAAGCAGTGGCTCGGGCAAGAGCACAGTTGTGTCCCTCATTGAGAGATTCTATGATCCTTCTTCAGGACAAGTGTTGCTAGATGGGCATGATGTGAAGTCATTGAAGCTTAGATGGTTGAGACAGCAAATAGGACTAGTGAGCCAAGAGCCTGCTTTGTTTGCTACCACAATCCGAGAAAACATACTCTTGGGTAGGCCTGATGCAAACCAGGATGAGATTGAAGAAGCTGCTAGAGTGGCTAATGCTCACTCCTTCATCATCAAACTTCCCGAAGGTTACGAAACTCAGGTAGGGGAGAGAGGGCTGCAACTTTCAGGAGGACAAAAGCAGAGAATAGCAATTGCAAGGGCAATGCTGAAAAATCCAGCAATTCTTCTCCTAGATGAGGCAACAAGTGCATTGGACTCGGAGTCAGAAAAGCTGGTTCAGGAGGCCCTTGATCGGTTCATGATTGGTAGAACAACTCTTGTAATTGCTCATCGCCTCTCCACGATTCGCAAAGCTGACCTTGTAGCTGTGCTTCAGCAAGGAAGTGTTACTGAAATTGGAACTCATGATGAGCTCTTTGCCAAAGGTGAAAATGGAGTCTATGCCAAGCTTATCCGGATGCAGGAGATGGCACATGAAACTTCTATGAATAATGCCAGAAAGAGTAGTGCAAGGCCTTCAAGTGCCAGAAACTCAGTAAGCTCACCCATAATTGCACGGAATTCTTCTTATGGCCGATCACCGTACTCTCGCAGACTATCTGACTTCTCTACATCTGATTTTAGCCTGTCCCTTGATGCATCACATCCAAATTACAGGCTTGAAAAGCTTGCCTTCAAAGATCAAGCCAGTTCCTTCTGGAGACTCGCAAAAATGAACTCTCCTGAATGGCTTTATGCCTTAATTGGTTCTATAGGATCTGTTGTTTGTGGATCCCTTAGTGCATTTTTTGCTTATGTTCTTAGTGCTGTTCTCAGTGTCTATTACAATCCAAACCACAGACACATGATCCGAGAAATTGGAAAGTACTGCTACTTGTTGATTGGGCTATCTTCAGCTGCACTTCTCTTCAATACATTGCAGCACTCCTTCTGGGATATTGTTGGTGAAAATCTTACAAAACGAGTGAGGGAGAAAATGTTGATTGCAGTGCTTAAAAATGAAATGGCATGGTTTGATCAGGAGGAAAATGAGAGTGCTAGGATTGCAGCAAGGCTATCTCTTGATGCCAACAATGTCAGATCAGCCATTGGAGATAGGATTTCAGTAATTGTGCAGAACACTGCACTTATGCTAGTTGCCTGCACTGCAGGGTTTGTATTGCAATGGCGCCTTGCCCTTGTACTAGTAGCCGTCTTCCCTGTTGTTGTTGCAGCCACTGTTTTGCAGAAAATGTTCATGACTGGTTTCTCTGGTGACCTGGAAGCTGCTCATGCCAAGGCCACTCAACTAGCAGGAGAGGCTATAGCCAATGTAAGGACAGTTGCTGCTTTTAATTCAGAAAAGAAAATTGTTGGCCTTTTCACCTCCAACCTTGAAGCTCCACTGCGGCGCTGCTTTTGGAAGGGACAAATTTCTGGGAGTGGTTATGGGATAGCTCAGTTTGCACTCTATGCTTCCTATGCACTTGGTCTTTGGTATGCTTCTTGGCTTGTGAAGCACGGTATATCTGATTTCTCTAAAACAATCCGAGTTTTTATGGTACTCATGGTCTCAGCTAATGGTGCTGCTGAAACTTTAACCCTGGCTCCTGACTTCATCAAGGGTGGTCGCGCCATGAGATCGGTCTTTGATCTCCTTGACCGAAGAACTGAGATTGAGCCAGATGATCCAGATGCTACCCCTGTCCCTGATTGCCTTCGCGGTGAAGTAGAACTTAAGCATGTTGATTTCTCTTATCCAACTAGACCAGATATGTCAGTTTTTCGCGACCTTAATCTTCGTGCCAGGGCAGGTAAAACTCTTGCCCTAGTAGGGCCTAGTGGCTGTGGAAAGAGCTCAGTCATTGCACTTATACAAAGGTTCTATGATCCAACATCCGGCAGGGTCATGATCGATGGAAAGGACATAAGGAAATACAATCTCAAGTCTCTTAGAAGGCACATTGCTGTGGTACCTCAGGAGCCATGCCTGTTTGCTACTACTATTTATGAGAACATTGCTTATGGACATGACTCAGCTACTGAAGCTGAGATCATAGAGGCTGCAACTCTTGCCAATGCTCACAAGTTCATATCTTCACTGCCTGATGGATACAAGACATTTGTTGGTGAGAGGGGAGTTCAATTATCTGGGGGACAAAAGCAAAGAATAGCAATTGCTAGAGCTTTTGTGAGAAAGGCAGAACTTATGCTTCTTGATGAGGCAACAAGTGCACTTGATGCTGAATCTGAGAGGTCTGTTCAGGAGGCGTTAGACCGCCCCTGCTCGGGAAAAACTACTATCATTGTTGCACACAGGCTATCAACTATTAGGAATGCTAATCTCATTGCTGTGATTGATGATGGGAAGGTTGCAGAGCAAGGCTCCCATTCACAGTTGTTAAAAAATCACCCTGATGGGATCTATGCACGCATGATTCAATTACAAAGGTTCACAAATAACCAAGTCAGTGGAATGGCCTCAGGTTCAAGTTCTTCTGCAAGGCCAAAAGATGATGAAAGAGAAGGCTAA 2889 0.4486 MAAFTKARVAAAKIFRVIDHKPGIDRKSESGLELESVTGLVELRNVDFSYPSRPEVMILNNFSLSVPAGKTIALVGSSGSGKSTVVSLIERFYDPSSGQVLLDGHDVKSLKLRWLRQQIGLVSQEPALFATTIRENILLGRPDANQDEIEEAARVANAHSFIIKLPEGYETQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVTEIGTHDELFAKGENGVYAKLIRMQEMAHETSMNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDASHPNYRLEKLAFKDQASSFWRLAKMNSPEWLYALIGSIGSVVCGSLSAFFAYVLSAVLSVYYNPNHRHMIREIGKYCYLLIGLSSAALLFNTLQHSFWDIVGENLTKRVREKMLIAVLKNEMAWFDQEENESARIAARLSLDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLVAVFPVVVAATVLQKMFMTGFSGDLEAAHAKATQLAGEAIANVRTVAAFNSEKKIVGLFTSNLEAPLRRCFWKGQISGSGYGIAQFALYASYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRRTEIEPDDPDATPVPDCLRGEVELKHVDFSYPTRPDMSVFRDLNLRARAGKTLALVGPSGCGKSSVIALIQRFYDPTSGRVMIDGKDIRKYNLKSLRRHIAVVPQEPCLFATTIYENIAYGHDSATEAEIIEAATLANAHKFISSLPDGYKTFVGERGVQLSGGQKQRIAIARAFVRKAELMLLDEATSALDAESERSVQEALDRPCSGKTTIIVAHRLSTIRNANLIAVIDDGKVAEQGSHSQLLKNHPDGIYARMIQLQRFTNNQVSGMASGSSSSARPKDDEREG 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03265 962 CDD ABC_MTABC3_MDL1_MDL2 41 280 - -
Pumo3g03265 962 Pfam ABC transporter 59 208 IPR003439 GO:0005524
Pumo3g03265 962 Gene3D ABC transporter type 1, transmembrane domain 662 939 IPR036640 GO:0005524|GO:0016020
Pumo3g03265 962 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 280 IPR027417 -
Pumo3g03265 962 ProSitePatterns ABC transporters family signature. 835 849 IPR017871 GO:0005524|GO:0016887
Pumo3g03265 962 PANTHER ABC TRANSPORTER B FAMILY 353 949 IPR039421 -
Pumo3g03265 962 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 41 277 IPR003439 GO:0005524
Pumo3g03265 962 SUPERFAMILY ABC transporter transmembrane region 360 683 IPR036640 GO:0005524|GO:0016020
Pumo3g03265 962 FunFam ABC transporter B family member 1 352 661 - -
Pumo3g03265 962 ProSitePatterns ABC transporters family signature. 180 194 IPR017871 GO:0005524|GO:0016887
Pumo3g03265 962 CDD ABC_6TM_Pgp_ABCB1_D2_like 362 678 - -
Pumo3g03265 962 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 373 660 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pumo3g03265 962 SMART AAA_5 68 254 IPR003593 GO:0016887
Pumo3g03265 962 SMART AAA_5 723 915 IPR003593 GO:0016887
Pumo3g03265 962 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 688 935 IPR027417 -
Pumo3g03265 962 Gene3D ABC transporter type 1, transmembrane domain 352 661 IPR036640 GO:0005524|GO:0016020
Pumo3g03265 962 FunFam ABC transporter B family member 1 31 281 - -
Pumo3g03265 962 Pfam ABC transporter transmembrane region 374 643 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pumo3g03265 962 Gene3D ABC transporter type 1, transmembrane domain 2 295 IPR036640 GO:0005524|GO:0016020
Pumo3g03265 962 Gene3D - 31 281 IPR027417 -
Pumo3g03265 962 Gene3D - 685 936 IPR027417 -
Pumo3g03265 962 FunFam ABC transporter B family member 19 662 684 - -
Pumo3g03265 962 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 696 932 IPR003439 GO:0005524
Pumo3g03265 962 MobiDBLite consensus disorder prediction 940 962 - -
Pumo3g03265 962 FunFam ABC transporter B family member 1 686 936 - -
Pumo3g03265 962 CDD ABC_MTABC3_MDL1_MDL2 696 935 - -
Pumo3g03265 962 Pfam ABC transporter 715 863 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03265 Pumo-Chr3 60190666 60195501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03265 14 959 Calmodulin-binding Proteins AT2G36910 89.124 0.0 1734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03265 K05658 - gmx:100777382 1735.7