Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03263 ATGGGAGGCAAATGTCCGCACCGGAACGTGAAGAAGAGAAGATATTCTCACAAGACAGCGCGGCGAACTAAATTTGAGTTGAAAGGGGACGATATGGTTTATGCGCAGCTAAACAAACCCGATGAAGAGAAAACCTCTTTACCCTTAGATGAAGATTTACCTGGGATGGGCCAGTACTATTGCCTTCACTGCGATCGGTACTTTTCCAATGTAGCTGTGAGGGATGAGCACTTTAAGACCAAACGACACAAGAAGCGTGTAAAACAAATGATGGGTCCTGCACCACATACTCAACTTGATGCCGACTTAGCTGCAGGGATGGGTATGCCAGACAATGGACCAAAGCTAATGTCTATGTAA 360 0.4583 MGGKCPHRNVKKRRYSHKTARRTKFELKGDDMVYAQLNKPDEEKTSLPLDEDLPGMGQYYCLHCDRYFSNVAVRDEHFKTKRHKKRVKQMMGPAPHTQLDADLAAGMGMPDNGPKLMSM 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03263 119 Pfam Zinc-finger double-stranded RNA-binding 58 84 IPR022755 -
Pumo3g03263 119 MobiDBLite consensus disorder prediction 1 20 - -
Pumo3g03263 119 FunFam Zinc finger protein 593 45 109 - -
Pumo3g03263 119 SUPERFAMILY beta-beta-alpha zinc fingers 47 110 IPR036236 -
Pumo3g03263 119 ProSitePatterns Zinc finger C2H2 type domain signature. 61 83 IPR013087 -
Pumo3g03263 119 Gene3D Classic Zinc Finger 45 109 - -
Pumo3g03263 119 SMART ZnF_U1_5 56 90 IPR003604 GO:0003676|GO:0008270
Pumo3g03263 119 PANTHER EXPRESSED PROTEIN 1 119 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03263 3 118 C2H2 Transcription Factor Family AT2G36930 78.448 1.66e-65 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03263 K14821 - gmx:100499707 249.21