Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03258 ATGCTTAGGTATTTTGTTGGGAGGATACAAAAGGGTCTTTCACTGTTTGTAGCTAGAAGGCCTGCATTCAGCTACTTCAGTGAAGATCGCGCCACAACTGCGGCACAAGATGATGTTATGGAAGGCTATTTTTCTGTTCTTGCAATCAAGGGTGAGGAAACCAAGAGGTTTATTGTTGGCTTAGACTACTTGTCTGATCCTGCATTCATGAGACTGCTGGACCAAGCTCGGGAAGAGTATGGTTTCAGACAGAAAGGAGCTCTTGCACTCCCTTGTCGGCCTCAAGAGTTACAGAAGATTCTAGATGCTCAAAAAGCATAA 321 0.4455 MLRYFVGRIQKGLSLFVARRPAFSYFSEDRATTAAQDDVMEGYFSVLAIKGEETKRFIVGLDYLSDPAFMRLLDQAREEYGFRQKGALALPCRPQELQKILDAQKA 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03258 106 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 32 100 IPR003676 GO:0009733
Pumo3g03258 106 Pfam Auxin responsive protein 30 102 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03258 Pumo-Chr3 60083220 60093092 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03258 38 93 Calmodulin-binding Proteins AT3G43120 46.429 4.18e-11 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03258 - - gmx:100818734 184.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g03258 3 60083220 60093092 Pumo3g03258 3 60083220 60093092 ECH