Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03247 ATGACCTCACAAGTTGTCCTACACAACAATTCTCAATTCTCTCACTCCGAAACCAAACCCTCCGCCACCGCCACCACCGAGTCCCCACCCACCGCGCCGCCGCTCGCCGTCGCCAAGAGGCCCTCCACCAAGGACCGCCACTCCAAGGTCAACGGCCGCGGCCGCCGCGTCCGCATGCCGCCGCTCTGCGCCGCGCGCATTTTCCAGCTCACGCGCGAGCTGGGCCACCGCTCCGACGGCGAGACCATCGAGTGGCTCCTCCGCCACGCCGAGCCCTCCATCATCGCCGCCACCGGCTCCGGCACCGTCCCCGCCGCCCCCCTCTCCTCCGTCGCTCCCACCGCTCCATCCTCCGAGCCCTCCCTCGCCTGCCCCGTCACGGCGGTCGGCGCTCAGGGGATGTTCGCCGTGGCGCCGCCGCAGCCGAGTTGCCGGCTCGACCTGTCCCCGCCGCCGGGGATGGAGTTCGCGGTGAACGGTTACCGGCACATGCCGTTCACGGCGCTGCTGTTGCAGCCGGCGACGGCGGAGGATAATCAGAACGACGATTCTCTCGGCGAACAATGA 567 0.6966 MTSQVVLHNNSQFSHSETKPSATATTESPPTAPPLAVAKRPSTKDRHSKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLLRHAEPSIIAATGSGTVPAAPLSSVAPTAPSSEPSLACPVTAVGAQGMFAVAPPQPSCRLDLSPPPGMEFAVNGYRHMPFTALLLQPATAEDNQNDDSLGEQ 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03247 188 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 29 127 IPR005333 GO:0003700
Pumo3g03247 188 ProSiteProfiles TCP domain profile. 43 97 IPR017887 -
Pumo3g03247 188 MobiDBLite consensus disorder prediction 1 30 - -
Pumo3g03247 188 MobiDBLite consensus disorder prediction 1 56 - -
Pumo3g03247 188 Pfam TCP family transcription factor 42 115 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03247 Pumo-Chr3 59856091 59857173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03247 1 175 TCP Transcription Factor Family AT2G37000 49.143 3.11e-47 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pumo3g03247 TCP 4.7e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03247 - - gmx:100779699 322.398