Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03244 ATGGATTTTCAGATAATTTTCAGAGATTTCAAATCTTCAAATATCCTTCTGGATGAGCAGTGGAATGCAAAGCTGTCAGACTTCGGGCTAGCTAGATTGGGACCATCTGATGGGTTGACTCATGTCTCAACAGCGGTTGTAGGAACAATGGGTTATGCAGCTCCTGAATATGTTCAAACTGGACGTCTCACATCAAAGAGTGATGTATGGAGCTATGGTGTCTTCCTTTATGAACTCATCACTGGCAGGCGTCCTATTGATCGAAATCGCCCCAAGGGTGAGCAGAAGCTGTTGGAATGGGTAAGGCCATACCTTTCAGATGGGAGGAAATTTCAACTAATATTGGATCCAAGACTTGAGAGAAAACACCTCTTGAAGTCAGCACAAAAACTTGCTATAATAGCTAACAGATGCTTGGTCAGAAACCCAAAGAATCGCCCAAAGATGAGTGAAGTGTTGGAAATGGTGACAAGGGTTGTGGAGTCTTCAGTGAGTACTAATCCACAGCCACCCTTGAAGAGTGTAGCCTCAGCAGAGGATTCTCAGGGTACTGAAACAAAGAACAAGAAAATGACCATGGATGAAAAACCAGATTGTAATTGGTTAAGGATGTGGAGGCCAAAGCTTTTCAGAGCATGTAGATTGTTGAAGCTTTAA 657 0.4292 MDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLTHVSTAVVGTMGYAAPEYVQTGRLTSKSDVWSYGVFLYELITGRRPIDRNRPKGEQKLLEWVRPYLSDGRKFQLILDPRLERKHLLKSAQKLAIIANRCLVRNPKNRPKMSEVLEMVTRVVESSVSTNPQPPLKSVASAEDSQGTETKNKKMTMDEKPDCNWLRMWRPKLFRACRLLKL 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03244 218 ProSiteProfiles Protein kinase domain profile. 1 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g03244 218 SUPERFAMILY Protein kinase-like (PK-like) 4 178 IPR011009 -
Pumo3g03244 218 MobiDBLite consensus disorder prediction 163 193 - -
Pumo3g03244 218 PANTHER OS01G0588500 PROTEIN-RELATED 4 158 - -
Pumo3g03244 218 MobiDBLite consensus disorder prediction 163 182 - -
Pumo3g03244 218 Gene3D Transferase(Phosphotransferase) domain 1 1 178 - -
Pumo3g03244 218 Pfam Protein kinase domain 4 154 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03244 Pumo-Chr3 59788256 59789803 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03244 5 160 Receptor kinase-like Gene Family AT3G58690 50.641 1.85e-47 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pumo3g03244 Pkinase 9.4e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03244 - - gmx:100305438 402.134