Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03243 ATGCTGTCTAGTTCAAGTCAGGTTGCAATGAAGTGTTTTCCATTCTACTTTGGAGAGAAGAAGGATGGTCCTAAGATCTTGCAGTCAATATCGGGTCGGTCCAACAGTTCTACTTATGTTGAGGGTGAGATGAGAAGATCTGGTTCTGAATTGAACTCTATGGATGCCTCAGACAACAGCACAGACTCCCTCAGGAGAAGTGCATTTCCCAGTTTGTCCCAAAGACCCAGCAACCTCAGAGTATTTACTGTATCTGAACTGAAAACAGCTACAAAGAGTTTTAGTCGCTCTGTCATGCTTGGAGAAGGTGGGTTCGGGTGTGTCTACAAAGGGTTTATCAAGAGTGTGAGTGTAGATGATCCTACCACAAAAATTGAAGTTGCAGTTAAACAACTTGGCAGAAGAGGAATTCAGGGGCATAAGGAATGGGTAACAGAAGTGAATGTTCTGGGTATTGTGGAGCATCCCAATCTGGTGAAACTAGTGGGATACTGTGCTGATGATGACGAAAGAGGAATCCAGCGGCTTCTTATTTATGAATATATGCCCAACAGAAGTGTGGAACACCATTTATCACCACGATCAGCAACTCCTCTCCCATGGAGTAGGAGATTGAAAATAGCACAAGATGCAGGCTCGTGGCTTAACATACCTGCATGA 660 0.4409 MLSSSSQVAMKCFPFYFGEKKDGPKILQSISGRSNSSTYVEGEMRRSGSELNSMDASDNSTDSLRRSAFPSLSQRPSNLRVFTVSELKTATKSFSRSVMLGEGGFGCVYKGFIKSVSVDDPTTKIEVAVKQLGRRGIQGHKEWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLIYEYMPNRSVEHHLSPRSATPLPWSRRLKIAQDAGSWLNIPA 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03243 219 MobiDBLite consensus disorder prediction 28 43 - -
Pumo3g03243 219 Pfam Protein tyrosine and serine/threonine kinase 99 210 IPR001245 GO:0004672|GO:0006468
Pumo3g03243 219 MobiDBLite consensus disorder prediction 21 68 - -
Pumo3g03243 219 MobiDBLite consensus disorder prediction 50 68 - -
Pumo3g03243 219 ProSiteProfiles Protein kinase domain profile. 94 219 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g03243 219 PANTHER OS01G0588500 PROTEIN-RELATED 57 213 - -
Pumo3g03243 219 FunFam Serine/threonine-protein kinase BIK1 60 181 - -
Pumo3g03243 219 Gene3D Transferase(Phosphotransferase) domain 1 72 217 - -
Pumo3g03243 219 ProSitePatterns Protein kinases ATP-binding region signature. 100 130 IPR017441 GO:0005524
Pumo3g03243 219 SUPERFAMILY Protein kinase-like (PK-like) 70 211 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03243 Pumo-Chr3 59787101 59788251 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03243 10 215 Glycoside Hydrolase AT3G07070 38.532 2.68e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pumo3g03243 PK_Tyr_Ser-Thr 1.5e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03243 - - gmx:100305438 388.652