Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03241 ATGCCTCCAAATTCTTCAAGCATTGAGCAGTCATCTGCAGCTTCGAAAGCGCAAAACAAGGGACCTACCAACCTTACTAAAATGTTGAATTCCTTTGAGGATGACCCACATAGCAATGAAGGATTCAATCTACAAATTGGAGATAAAAATATTAAAAAGCAGATGCCAAAGGGCAAACAGTTACATACACAAAGCCAAATTTTAAGGTATGCTTATGGCCAGATTGAGAAGGAGAAAGCTCAACAAGAGAAAAACAAGAACTTGACTTTCTCGGGAGTTATTTCAATGGCTACTGAAGGTGAGGTTCGAACAAGGCCTGTGATTGAGGTAGCTTTTAAAGATTTAACTCTTACTTTGAAAGGTAAAAGAAAACATATAATGAGATGTGTGACTGGTAAACTCATGCCGGGTCGAGTTTCTGCTGTGATGGGTCCCTCGGGAGCTGGCAAAACTACATTTCTTTCTGCCTTGGCAGGGAAAGCAAGAGGATGCACTATGACAGGCTCAATTCTAATCAATGGAAAGCCTGAATCCATTCATTGTTATCAGAAAATTGTCGGTTTTGTGCCACAAGATGATATTGTGCATGGGAACTTGACAGTGGAGGAAAATCTTCGTTTCAGTGCAAGATGCAGACTATCTGCGGATATGCCAAAACCAGATAAGGTTCTGATTGTTGAAAGAGTAATTGAGTCCTTAGGACTCCAGGCAGTGAGGGATTCCCTTGTTGGGACAGTAGAGAAGCGAGGTATATCTGGAGGGCAACGAAAGCGTGTAAATGTAGGGATGGAGATGGTTATGGAGCCTTCATTATTAATCTTAGATGAGCCTACAACTGGCCTAGACAGTGCATCTTCCACTTTACTGCTTAAAGCACTTCGTCGTGAAGCACTTGAAGGGGTAAATATCTGCATGGTACTTCACCAACCAAGCTATACTTTGTTCAGAATGTTTGATGATATAATCTTTCTAGCCAAAGGTGGCCTTACTGCATATCATGGTCCTGTTAAAAAAGTAGAAGAATACTTTGCTGGCATTGGAATCACTGTACCTGATCGTGTGAATCCTCCAGACCATTTCATTGACATTTTGGAAGGTTTAGTGAAACCAAATGGAAGTGTGACCCATCAACAACTTCCTGTCAGATGGATGTTACATAATAGTTACCCAGTACCACCAGATATGCTTCATTTTGCTGATCAAATTGCTGCCTCCTCCTCCTCAAATATAAATGATCCAATAAAGGGCACTGATGAAGTTGCTGATCAATCCTTTGCTGGAGAGTTTTGGGAGGATATGAAGAGTAATGTTCAGATGCAACGAGATCATATAGAGGCAACCTTCTTAAAGACTAAGGACTTATCTAATAGAAGAACTCCGGGTGTAGCTCGACAATATAGATATTACCTTGGGCGGATTTGTAAGCAGACACTACGAGAAGGACAATCACAAGCAGTTGACTACCTCCTTTTATTAGTTGCTGGTGCTATATTAGGAACTCTTACTAAAGTAAATGATGAAACGTTTGGGTCCCTCGGATATACCTATACTGTTATTGCTGTCTCTTTACTTTGCAAGATTGCAGCTCTCAGATCATTTTCTCTGGATAAATTACAATACTTGGAGGGAGAGTGCATCTGGAATTAG 1647 0.408 MPPNSSSIEQSSAASKAQNKGPTNLTKMLNSFEDDPHSNEGFNLQIGDKNIKKQMPKGKQLHTQSQILRYAYGQIEKEKAQQEKNKNLTFSGVISMATEGEVRTRPVIEVAFKDLTLTLKGKRKHIMRCVTGKLMPGRVSAVMGPSGAGKTTFLSALAGKARGCTMTGSILINGKPESIHCYQKIVGFVPQDDIVHGNLTVEENLRFSARCRLSADMPKPDKVLIVERVIESLGLQAVRDSLVGTVEKRGISGGQRKRVNVGMEMVMEPSLLILDEPTTGLDSASSTLLLKALRREALEGVNICMVLHQPSYTLFRMFDDIIFLAKGGLTAYHGPVKKVEEYFAGIGITVPDRVNPPDHFIDILEGLVKPNGSVTHQQLPVRWMLHNSYPVPPDMLHFADQIAASSSSNINDPIKGTDEVADQSFAGEFWEDMKSNVQMQRDHIEATFLKTKDLSNRRTPGVARQYRYYLGRICKQTLREGQSQAVDYLLLLVAGAILGTLTKVNDETFGSLGYTYTVIAVSLLCKIAALRSFSLDKLQYLEGECIWN 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03241 548 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 74 540 - -
Pumo3g03241 548 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 110 333 IPR027417 -
Pumo3g03241 548 FunFam ABC transporter G family member 24 104 346 - -
Pumo3g03241 548 Gene3D - 100 346 IPR027417 -
Pumo3g03241 548 Pfam ABC-2 type transporter 308 541 IPR043926 GO:0140359
Pumo3g03241 548 MobiDBLite consensus disorder prediction 1 38 - -
Pumo3g03241 548 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 110 351 IPR003439 GO:0005524
Pumo3g03241 548 MobiDBLite consensus disorder prediction 1 39 - -
Pumo3g03241 548 SMART AAA_5 136 328 IPR003593 GO:0016887
Pumo3g03241 548 ProSitePatterns ABC transporters family signature. 251 265 IPR017871 GO:0005524|GO:0016887
Pumo3g03241 548 CDD ABCG_EPDR 108 334 - -
Pumo3g03241 548 Pfam ABC transporter 130 278 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03241 Pumo-Chr3 59770641 59774391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03241 137 330 Calmodulin-binding Proteins AT2G36910 27.723 3.46e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03241 - - gmx:100812387 1009.59