Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03228 ATGGTGGTGGAAGAGCTAACAAAAACCAAGGCCTTGATACACCATGTCATCACTGGCCGTTGGTTCATGATCTTTGCATCATGTCTCATCATGGCGGTTTCAGGAGCAACCTACATGTTTGGTTTATTCTCCAACGAGGTCAAAGCCTCTCTGGGGTATGACCAGTCAACGCTCAACTTGATAAGCTTCTTCAAGGACCTTGGTGCCAACCTTGGAATTTTCTCAGGGTTGATCAATGAGATAAGCCCCCCTTGGGTGATACTAGCCATGGGAGCCACTATGAACTTCATTGGCTACTTCATGATATGGCTCTCTGTCACTTCACGCATTGCCAAACCCCAAGTGTGGCAAATGTGTCTCTACTTTTACATTGGTGCTAATTCTCAGTCTTTTGCCAACACTGGTGCTTTGGTTAACTGTGTCAAAAGCTTCCCAAGAAGCCGTGGAAGTGTTATTGGTCTTCTCAAGGGTTATGTGGGTCTAAGTGGTGCTATTTTCACTCAGCTTTACCATGCCTTCTATGGTGACAACTCTAAGGCTCTTATATTCCTCATTGGGTGGCTTCCTGCTGCTATTTCCTTCATTTTCCTTCCAACTGTTAGGGTGTTGAGTATAACCCCACAGCCCAAAGAGATCAAGGTTTTCTACCAACTTCTTTATATCTCACTTGGGGTTGCAGGGTTTCTCATGGTGTTGATTGTGATACAAAACAAGTTGAGTTTCACAAAGGTGGAGTACATAGTGGATGGCATGGTGGTTCTTCTCTTGCTTCTTCTCCCTCTTGGTGTTGTGTTTAAAGAAGAATTCAAACTTTGGAAGAACCAAAACCAAAACCAAACCTTCACTGATCATGCAGATGCTGCTGCTTCAGTTGTTGAATTGCCAGCAGCCAGAAGAAGCACATGCAGCACCATCTCATTCAGAAAGGAAAAACAACTCATGTTTGAAGAACGTTTTCAAACCTCCAAAAAGGGGTGA 978 0.4407 MVVEELTKTKALIHHVITGRWFMIFASCLIMAVSGATYMFGLFSNEVKASLGYDQSTLNLISFFKDLGANLGIFSGLINEISPPWVILAMGATMNFIGYFMIWLSVTSRIAKPQVWQMCLYFYIGANSQSFANTGALVNCVKSFPRSRGSVIGLLKGYVGLSGAIFTQLYHAFYGDNSKALIFLIGWLPAAISFIFLPTVRVLSITPQPKEIKVFYQLLYISLGVAGFLMVLIVIQNKLSFTKVEYIVDGMVVLLLLLLPLGVVFKEEFKLWKNQNQNQTFTDHADAAASVVELPAARRSTCSTISFRKEKQLMFEERFQTSKKG 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03228 325 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 21 282 - -
Pumo3g03228 325 SUPERFAMILY MFS general substrate transporter 20 237 IPR036259 -
Pumo3g03228 325 Pfam Nodulin-like 20 264 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03228 Pumo-Chr3 59576212 59577189 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03228 10 321 Nodulin-like Gene Family AT2G39210 57.508 7.57e-123 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03228 - - gmx:100814000 535.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g03228 3 59576212 59577189 Pumo3g00252 3 3235754 3237981 ECH
Pumo3g03228 3 59576212 59577189 Pumo3g03228 3 59576212 59577189 ECH
Pumo5g03089 5 79216676 79218900 Pumo3g03228 3 59576212 59577189 PCT