Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03208 ATGGCGTTCCGCAGCGCCATCGTGCGCAGAGCCCAAGAGGCCACTCACCGCGACACGTGGCGAGCCGCTCTCTCCGAATTCATCTCCACACTCATCTTCGTCTTCGCCGCCTCCGGCTCCGCCGTCGCCGTCAACAAGCTCGCCGTCGACAAGCCCTCCGCTCTCGTCATCGCCGCCCTCGCCCACGCCTTCGCCCTCTTCGTCGCCGTCTCTGTAAGTGCCAACATCTCCGGCGGCCACGTCAACCCCGCCGTCACCTTCGCCGCCTTCGTCGGCGGCAACCTCACCTTGCTCCGCTGCGTCCTCTTCTGGATCGCCCAGATCCTCGGCTCCGTCGTCGCGTGCTTGCTCCTCAAATTCACCACCGGCGGACAGGGTGTACCGGTTTTTAAACTTTCGAGTGGTGTGGGAGCGGGGAACGCGGTGGTGTTGGAGATGGTGATGACGTTCGGGTTGGTTTACACGGTGTTCGCGACTACCGTTGACCCAAGGAGCAGGAGGGGTACTTTGGGATTGGGAGTGATAGCGCCAATTGTGATTGGGTTTATCGTTGGAGCGAATATTTTGGTGGGTGGGCCTTTCGATGGGGCCTCCATGAACCCGGCTGCGTCGTTTGGGCCTGCAGTGGTGGGCTGGAGCTGGAAAAACCATTGGGTTTACTGGGTTGGGCCTCTCGTTGGTGGTGGCCTTGCTGGCTTTATTTATGAGCTTATCTTTGTTAGCCACAGCCGCCAGAGGTTCCGCAGAAGTTATAATTAA 759 0.5982 MAFRSAIVRRAQEATHRDTWRAALSEFISTLIFVFAASGSAVAVNKLAVDKPSALVIAALAHAFALFVAVSVSANISGGHVNPAVTFAAFVGGNLTLLRCVLFWIAQILGSVVACLLLKFTTGGQGVPVFKLSSGVGAGNAVVLEMVMTFGLVYTVFATTVDPRSRRGTLGLGVIAPIVIGFIVGANILVGGPFDGASMNPAASFGPAVVGWSWKNHWVYWVGPLVGGGLAGFIYELIFVSHSRQRFRRSYN 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03208 252 PANTHER AQUAPORIN-8 9 242 IPR034294 -
Pumo3g03208 252 Gene3D Glycerol uptake facilitator protein. 4 250 IPR023271 -
Pumo3g03208 252 FunFam Probable aquaporin TIP1-1 4 250 - -
Pumo3g03208 252 ProSitePatterns MIP family signature. 80 88 IPR022357 -
Pumo3g03208 252 SUPERFAMILY Aquaporin-like 12 245 IPR023271 -
Pumo3g03208 252 Pfam Major intrinsic protein 14 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo3g03208 252 CDD MIP 21 238 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo3g03208 252 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo3g03208 252 PRINTS Major intrinsic protein family signature 99 118 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo3g03208 252 PRINTS Major intrinsic protein family signature 144 162 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo3g03208 252 PRINTS Major intrinsic protein family signature 218 238 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo3g03208 252 PRINTS Major intrinsic protein family signature 181 203 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo3g03208 252 PRINTS Major intrinsic protein family signature 62 86 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03208 Pumo-Chr3 59221194 59222989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03208 1 250 Major Intrinsic Protein MIP AT2G36830 65.217 7.58e-113 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03208 K09873 - gmx:100820403 439.113