Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03197 ATGATAACCATTGTGACTTCTTACAATGTCACTCCAAATCAACCAACTCCCAAAGATCCTATATGGTTATCCGATAGTGACCAAATCGGGAACCTACGTCATGTATCCACCATCTACATTTACAAATCAAAACACATGGACAACACCATTGAGAGGATGAAGAACTCTCTTAGCAAGATTTTAGTGCACTACTATCCCGTAGCTGGCAGGTTGAGGTTGACAAAAAGTGGTCGAATGGAACTGGATTGTAATGCAAAAGGAGTGACGTTGCTTGAAGCTGAAAGCACAGCCACATTTGATAACATGGCTGAGCAAAACAAGACAAGTGCTGTATTGTTAAAACTCTCATCAAGCCAAGTGGAGAAGCTAAAGAAGAATGCTAATGATCAACCTTCAAAAGAAGGGGTAAGACTTTATAGCAGATTTGAAGCTATTTCTGCTCATATATGGAGATGTGCATCTACGGCTCGTGAATCTGGTGAGAGCCAACCAACTGTAGTTACGTTTAGTGTTGATATTCGCAATAGATTGAATCCACCTCTCCGTCAGAAATACTTTGGGAATGCTTTGGCAAAAGCAGTGACACCTAAATGTTTTGTGAGAGATATCATATCAAACCCATTAAGTTATGTTGCTCAACAGATAAGGGAAGCAGCTTATGCGGTTACATGA 672 0.4033 MITIVTSYNVTPNQPTPKDPIWLSDSDQIGNLRHVSTIYIYKSKHMDNTIERMKNSLSKILVHYYPVAGRLRLTKSGRMELDCNAKGVTLLEAESTATFDNMAEQNKTSAVLLKLSSSQVEKLKKNANDQPSKEGVRLYSRFEAISAHIWRCASTARESGESQPTVVTFSVDIRNRLNPPLRQKYFGNALAKAVTPKCFVRDIISNPLSYVAQQIREAAYAVT 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03197 223 Gene3D - 90 223 IPR023213 -
Pumo3g03197 223 Pfam Transferase family 104 219 - -
Pumo3g03197 223 Pfam Transferase family 1 102 - -
Pumo3g03197 223 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03197 Pumo-Chr3 58823022 58823749 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03197 108 217 Monolignol Biosynthesis Gene Families AT5G48930 32.727 5.12e-12 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03197 K13065 - gmx:100814459 191.43