Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03184 ATGCCTTCCTCACTCTCCCATCTCACACTCACATCCCTCTCTCTCTTCCCTCCCCGCAGATCCATTCCCACTCCAAAACCCTATCGCCTCTCCGTCAAATCCTCCATCAACAAACCCCCCGAACCCACCAGCAGCACCACCAAGCCCACCTCCTGGGTCAGCCCCGACTGGCTCACCTCCCTCTCCCGCTCCCTCACCGCCGGCAACGACGACTCCGGCATCCCCGTCGCCTCCGCCAAGCTCGACGACGTCTCCGATCTCCTCGGCGGCGCCCTCTTCCTCCCCCTCTTCAAGTGGATGCAGGACTACGGCCCCATTTACCGCCTCGCCGCGGGCCCCAGGAACTTCGTGGTGGTTAGCGACCCCGCCATTGCCAAGCACGTGCTCAGGAACTACGGGAAGTACGCCAAGGGTCTCGTTGCTGAGGTCTCCGAGTTCCTGTTCGGGTCCGGTTTTGCCATTGCCGAAGGTCCGCTCTGGATGGCAAGGCGCAGGGCTGTGGTTCCATCTCTTCATAAACGGTACTTGTCTGTTATAGTGGATAGGGTGTTTTGTAGATGTGCCGAGAGATTAGTGGAGAAGCTACAACCTGATTCACTCAATGGAACTGCTGTTAACATGGAGGAGAAGTTTTCACAGTTGACTCTTGATGTTATTGGTTTATCTGTATTTAACTATAACTTTGACTCGCTCAGTGCAGACAGTCCTTTTAAATTTCTTTGTAAGATAATTCCAAGACAAATAAAGGCTGAAGAGGCTGTTAGCGTTATCAGGAAAACTGTTGAAGATCTTATTGAAAAATGTAGAGTGATTGTAGAATCTGAGGGTGAAAGAATTGATGTCGAGGAATATGTGAATGACACTGACCCTAGTATCCTCCGGTTCTTGCTTGCCAGCAGAGAAGAGGTTTCCAGTGTGCAATTAAGGGATGATCTTTTGTCACTGTTAGTTGCTGGTCATGAGACCACCGGTTCAGTGCTGACCTGGACACTTTATCTTCTAAGCAAGGATTCTTCCTCTTTGGCAAAAGCACAAGAGGAGGTAGACAGAGTTTTACAGGGAAGGCGTCCTACCTATGAAGATATTAAAGAACTTAAGTTCTTGACACGCTGCATTATTGAGTCACTCCGGCTCTATCCACATCCTCCGGTATTGATAAGAAGAGCTCAAGTTCCTGACGAGCTTCCAGGTGCTTACAAAGTCAATGCTGGTCAAGATATTATGATTTCTGTATACAACATACATCGTTCTTCCGAGGTTTGGGATAGGGCTGAAGAGTTTGTGCCAGAAAGATTTGATTTGGATGGTCCAGTTCCAAATGAAACAAACACAGATTTCAGATTCATTCCATTCAGTGGAGGCCCCCGCAAATGTGTTGGTGATCAGTTTGCTTTATTGGAAGCTATAGTTGCTCTAGCAATCTTTCTACAGCACATGAACTTCGAACTGGTTCCTGATCAGAATATCAGTATGACTACAGGAGCAACAATACACACAACAAATGGATTGTACATGAAACTGAGCCGACGGTTGAAATAG 1539 0.4834 MPSSLSHLTLTSLSLFPPRRSIPTPKPYRLSVKSSINKPPEPTSSTTKPTSWVSPDWLTSLSRSLTAGNDDSGIPVASAKLDDVSDLLGGALFLPLFKWMQDYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGKYAKGLVAEVSEFLFGSGFAIAEGPLWMARRRAVVPSLHKRYLSVIVDRVFCRCAERLVEKLQPDSLNGTAVNMEEKFSQLTLDVIGLSVFNYNFDSLSADSPFKFLCKIIPRQIKAEEAVSVIRKTVEDLIEKCRVIVESEGERIDVEEYVNDTDPSILRFLLASREEVSSVQLRDDLLSLLVAGHETTGSVLTWTLYLLSKDSSSLAKAQEEVDRVLQGRRPTYEDIKELKFLTRCIIESLRLYPHPPVLIRRAQVPDELPGAYKVNAGQDIMISVYNIHRSSEVWDRAEEFVPERFDLDGPVPNETNTDFRFIPFSGGPRKCVGDQFALLEAIVALAIFLQHMNFELVPDQNISMTTGATIHTTNGLYMKLSRRLK 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03184 512 CDD CYP97 94 504 - -
Pumo3g03184 512 MobiDBLite consensus disorder prediction 28 52 - -
Pumo3g03184 512 Gene3D Cytochrome P450 75 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g03184 512 Pfam Cytochrome P450 96 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g03184 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Pumo3g03184 512 PANTHER CYTOCHROME P450 FAMILY 4 98 510 - -
Pumo3g03184 512 MobiDBLite consensus disorder prediction 26 52 - -
Pumo3g03184 512 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g03184 512 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g03184 512 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g03184 512 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g03184 512 SUPERFAMILY Cytochrome P450 90 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g03184 512 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g03184 512 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g03184 512 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g03184 512 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g03184 512 PRINTS E-class P450 group I signature 100 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g03184 512 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03184 Pumo-Chr3 58471391 58477609 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03184 17 510 Cytochrome P450 AT3G53130 76.731 0.0 826
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03184 K09837 - gmx:100803324 915.99