Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03162 ATGGACGAGATAACGATTTTGCAACAGATTGCGGAGGGAGACCCTGATGATAAGAAATGTGTGGTGAAGCTTTTGGACCATTTCAAGCATTCTGGTCCCAATGGGCAGCATGTTTGCATGGTGTTTGAGTACCTTGGGGACAATCTTTTGACTCTTATTAAGTACTCTGATTATCGCGGGTTGCCTACTGCCATGGTTAAGGAGATTTGCTTTCATATTCTGGTTGGATTGGATTACTTGCACAAGCAGCTTTCTATCATACATACTGACTTGAAGCCTGAGAACATCCTGCTCTTGTCAATGATTGATCCGTCTAAGGATCCTAGGAAGTCTGGGGCACCACTTATTCTTCCTAATAGTAAAGATAAGACAGCACTGGAGTCGGCAGGGGTGAAAGATACGAAGACGTTGAATGGGGATTTGGTTAAGAATCATAAGAAGAAGATTAAGAGAAAAGCTAAGCAAGCAGCCCATGGATGTGTTGAGAAGGAAGCTTCTGAAGGAGTTGAGGGTAATGCTGAAACCTCTGGGGCTGTGGAATCGTCTCCAAATGCGAGTTCTGCAAGAGAACAGGCTTCTAGTTCTGCAGGAACTAGTAGGTTATCGGATGCTGATGGAACAAAGTTGAAAGAGCAGGGTAACAAAAGAGGAAGCCGCTCTATGAGACAGAAGCTGTTGGCATCGGCTGATCTCAAGTGCAAGTTAGTGGACTTCGGTAATGCCTGCTGGACATATAAACAGTTTACTAATGATATCCAGACAAGACAGTATCGGTGCCCAGAGGTGATCCTTGGGTCAAAATATTCTACGTCTGCAGATCTTTGGTCCTTTGCTTGCATTTGTTTTGAGCTTGCATCTGGAGATGTGTTATTTGATCCTCACAGTGGTGACAACTTTGATAGGGATGAGGACCACTTAGCATTAATGATGGAACTTCTTGGAATGATGCCACGTAAGATAGCACTAGGTGGCCGTTATTCCCGTGATTTCTTTAATAGATATGGTGACTTAAGGCACATTCGGCGGTTGCGATTCTGGCCCTTGAATAAAGTCCTCATGGAGAAGTATGACTTCAGTGAGAAAGATGCAAATGATATGACAGACTTTTTGGTTCCTATCCTTGACTTTGTTCCTGAGAAGCGGCCAACAGCTGGTCAGTGCCTTCTCCATCCATGGATGAATGCTGGTCCACGCCTTTTGGAGCCATCTGCGCCTTCTAATCACAACCCTGCTGTTGAAACTTCTGCTTCAGATCAGAAGAAAAGGGACAAAGATGAGAGGGAGGCCATGGAGCTAGGAATGGGAAATATTGTTATCAATTCAGATTCTAAACCACTGACGCATTCTCCATCAAAGAAAGTCTTCCAAGGCAGCCAGAAGTAG 1383 0.4447 MDEITILQQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGDNLLTLIKYSDYRGLPTAMVKEICFHILVGLDYLHKQLSIIHTDLKPENILLLSMIDPSKDPRKSGAPLILPNSKDKTALESAGVKDTKTLNGDLVKNHKKKIKRKAKQAAHGCVEKEASEGVEGNAETSGAVESSPNASSAREQASSSAGTSRLSDADGTKLKEQGNKRGSRSMRQKLLASADLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKYSTSADLWSFACICFELASGDVLFDPHSGDNFDRDEDHLALMMELLGMMPRKIALGGRYSRDFFNRYGDLRHIRRLRFWPLNKVLMEKYDFSEKDANDMTDFLVPILDFVPEKRPTAGQCLLHPWMNAGPRLLEPSAPSNHNPAVETSASDQKKRDKDEREAMELGMGNIVINSDSKPLTHSPSKKVFQGSQK 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03162 460 ProSiteProfiles Protein kinase domain profile. 1 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g03162 460 MobiDBLite consensus disorder prediction 175 202 - -
Pumo3g03162 460 MobiDBLite consensus disorder prediction 415 431 - -
Pumo3g03162 460 SMART serkin_6 4 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g03162 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 86 98 IPR008271 GO:0004672|GO:0006468
Pumo3g03162 460 Pfam Protein kinase domain 3 99 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g03162 460 Pfam Protein kinase domain 225 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g03162 460 MobiDBLite consensus disorder prediction 145 221 - -
Pumo3g03162 460 MobiDBLite consensus disorder prediction 155 169 - -
Pumo3g03162 460 Gene3D Transferase(Phosphotransferase) domain 1 42 394 - -
Pumo3g03162 460 Gene3D Phosphorylase Kinase; domain 1 1 41 - -
Pumo3g03162 460 MobiDBLite consensus disorder prediction 399 460 - -
Pumo3g03162 460 FunFam Serine/threonine-protein kinase SRPK-like protein 223 393 - -
Pumo3g03162 460 MobiDBLite consensus disorder prediction 440 460 - -
Pumo3g03162 460 MobiDBLite consensus disorder prediction 204 218 - -
Pumo3g03162 460 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 1 424 - -
Pumo3g03162 460 SUPERFAMILY Protein kinase-like (PK-like) 2 407 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03162 Pumo-Chr3 58207293 58222681 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03162 1 444 EF-hand Containing Proteins AT5G22840 67.634 0.0 607
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Pumo3g03162 Pkinase 1e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03162 K08832 - gmx:100803070 875.159