Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03153 ATGACACTCATGCACTCACCCTCTTCCGTCGCCAGAGCGACCTCCACGGCTACCTCCTCCAGAACTGGACCGGCGGCGACGCCTTGCGCCGCCGCGTGGCGCGGCGTTCATTGCTCTCCGAACGGCCGCGTCACCGTCCTCTCCCTCCCTTCCCTCAACCTCCGTGGCCCCATAGACCCTCTCACTCCCCTCACCCACCTCCGCCTCCTCAACCTCTACGACAACCGCTTAAACGGCACCGTTTCGTCTCTCTTCTCCAACTGCACCAACCTCCAGCTTCTATACCTCAGCAGCAACGACTTCTCCGGCGAGATTCCGCCGGAGATATCCTCCTTAAAATCCCTCCTCCGCCTCGACCTCTCCGACAACAACCTTCGCGGCAAGGTTGATTTCATATCCAACCTAACACAACTCATAACGTTAAGACTCCAGAACAACCTTCTCTCTGGCAAAATCCCCGACCTCTCTTCCTCCATGAAGAACCTCAGAGAACTCAACATGACAAACAACGAGTTCTACGGTAGCTTACCAAACCCCATGCTGAAGAAGTTCGGTGCCACAACCTTCTCCGGTAACGAAGGTTTATGTGGTGCAACTCCGTTACCGGTTTGTTCCTTCACCACAACCCCTCCTAACGATAATGATAATAATAATAATGAACCGTCTGATGATAAGACGGTTCCTTCAAACCCTAGCTCCTTTCCCGAGACAAGCGTGATAGCTCGTCCGGGGAAGGAGCCTCGCAAGGGTTTGAGCCCTGGTGCCATTGTGGCCATTGTGGTTGCAAACTGCGTGGCGTTGCTCGTGGTGATGTCGTTCGCGGTGGCGCATTGTTGTGCTAGAGGGAGAGGTTCGAGTTTGGTGGGGAGTGGGGAGAGTTATGGGAAGAGGAAGAGTGGGAGCAGCTACAATGGGAGTGAGAAGAAGGTGTCTGCGAGTGGGGGTGGTGAGAGTGATGGAACCACTGGGACTGATAGGAGTAGGCTTGTGTTTTTTGATCGGAGGAGTGAGTTTGAGTTGGAGGATTTGCTGCGTGCTTCGGCGGAGATGCTTGGGAAGGGGAGTTTGGGGACGGTTTATAGGGCGGTGCTTGATGATGGATGCACCGTGGCGGTGAAGAGGCTCAAGGATGCGAACCCTTGCGTGAGGCATGAGTTTGAGCAGTATATGGATGTGATTGGGAAGCTTAAGCATCCTAATGTTGTGAGGCTCAAAGCCTATTACTATGCCAAGGAGGAAAAGCTTCTTGTCTATGATTATCTCTCCAATGGAAGCTTGCATGCTCTTCTTCATGGGAACCGTGGTCCGGGAAGAATTCCACTGGATTGGACTACAAGAATAAGCCTGGTATTAGGCGCAGCAAGAGGCCTCGCCAAGATTCACGCAGAGTACAGCTCCGCCAAAGTCCCTCACGGGAACGTGAAATCCTCCAACGTGCTTCTAGACAAGAACGGCGTTGCATGCATCTCCGACTTCGGGCTATCACTCCTCTTGAACCCCGTTCACGCCATTGCACGGTTGGGAGGGTACAGGGCCCCGGAACAGGAACACAACAAGAGACTATCCCAGCATGCTGACGTGTACAGCTTTGGCGTGTTGCTGTTGGAGGTTCTCACGGGAAGAGCGCCTTCGTCGCAGTACCCTTCACCGGCCCGGCCCAGAATGGAGGAAGAGCTGCAGGAACAGGCCGTTGTGGACCTTCCCAAGTGGGTCCGCTCGGTGGTGAGGGAAGAGTGGACCGCGGAGGTGTTTGACCAGGAGCTGCTGCGCTACAAGAACATTGAGGAGGAGCTTGTTTCAATGCTGCACGTCGGATTGGCTTGCGTGGCGGCGCAGCCTGAGAAGAGGCCAACTATGGAGGAGGTTGTCAAGATGATTGAGGAGATTAGGGTGGAGCAGTCGCCTCTTGGGGAGGACTATGATGAATCGCGCAATTCGCTCTCGCCTTCCATTCCCACCACTGAAGATGGTCTAGCTTAG 1980 0.546 MTLMHSPSSVARATSTATSSRTGPAATPCAAAWRGVHCSPNGRVTVLSLPSLNLRGPIDPLTPLTHLRLLNLYDNRLNGTVSSLFSNCTNLQLLYLSSNDFSGEIPPEISSLKSLLRLDLSDNNLRGKVDFISNLTQLITLRLQNNLLSGKIPDLSSSMKNLRELNMTNNEFYGSLPNPMLKKFGATTFSGNEGLCGATPLPVCSFTTTPPNDNDNNNNEPSDDKTVPSNPSSFPETSVIARPGKEPRKGLSPGAIVAIVVANCVALLVVMSFAVAHCCARGRGSSLVGSGESYGKRKSGSSYNGSEKKVSASGGGESDGTTGTDRSRLVFFDRRSEFELEDLLRASAEMLGKGSLGTVYRAVLDDGCTVAVKRLKDANPCVRHEFEQYMDVIGKLKHPNVVRLKAYYYAKEEKLLVYDYLSNGSLHALLHGNRGPGRIPLDWTTRISLVLGAARGLAKIHAEYSSAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVHAIARLGGYRAPEQEHNKRLSQHADVYSFGVLLLEVLTGRAPSSQYPSPARPRMEEELQEQAVVDLPKWVRSVVREEWTAEVFDQELLRYKNIEEELVSMLHVGLACVAAQPEKRPTMEEVVKMIEEIRVEQSPLGEDYDESRNSLSPSIPTTEDGLA 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03153 659 Gene3D Transferase(Phosphotransferase) domain 1 421 647 - -
Pumo3g03153 659 MobiDBLite consensus disorder prediction 634 659 - -
Pumo3g03153 659 MobiDBLite consensus disorder prediction 295 322 - -
Pumo3g03153 659 Gene3D Ribonuclease Inhibitor 118 205 IPR032675 -
Pumo3g03153 659 MobiDBLite consensus disorder prediction 207 249 - -
Pumo3g03153 659 Gene3D Ribonuclease Inhibitor 2 116 IPR032675 -
Pumo3g03153 659 ProSiteProfiles Protein kinase domain profile. 345 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g03153 659 MobiDBLite consensus disorder prediction 1 24 - -
Pumo3g03153 659 Pfam Protein kinase domain 349 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g03153 659 FunFam Nuclear pore complex protein NUP107 1 154 - -
Pumo3g03153 659 Gene3D Phosphorylase Kinase; domain 1 320 420 - -
Pumo3g03153 659 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 421 638 - -
Pumo3g03153 659 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 17 631 IPR046959 -
Pumo3g03153 659 SUPERFAMILY Protein kinase-like (PK-like) 349 627 IPR011009 -
Pumo3g03153 659 MobiDBLite consensus disorder prediction 207 237 - -
Pumo3g03153 659 SUPERFAMILY L domain-like 27 178 - -
Pumo3g03153 659 CDD STKc_IRAK 351 629 - -
Pumo3g03153 659 MobiDBLite consensus disorder prediction 285 322 - -
Pumo3g03153 659 FunFam pollen receptor-like kinase 1 316 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03153 Pumo-Chr3 58037036 58040578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03153 29 655 Receptor kinase-like Gene Family AT2G36570 66.771 0.0 822
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pumo3g03153 Pkinase 2.1e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03153 - - gmx:100804135 1076.23