Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03152 ATGGCTTGCATGTGGCTCAAGAATGCCTGTGGTGGTGGCAGTGGGAACAAGAAGCCGCCGCCGCCGGCAGACGTGCCACGTGGCCACTTGGCTGTGATGGTGGGAGAGGCAAAGAGGAGGTTTGTGATAAGGGCTGATTACCTTAACCATCCCTTGCTCCAACAACTGCTGGACCAATATGAAGGCAATTTTGGCTTCAACAAGAGTGGACCTCTGGCTATACCTTGTGATGAGTACCTTTTTGAAGATATTATTCAGGCCCTCAGAGATGGAACATCATCCTCATCCTCCTCTAGCCATGTGCCTCTCAAGAAGCTAGACTTGTCCAAGGACTCTATGCCATTACTTCAAGCTGATGGCTTTGATGGCAAAAGGAGGAGCACCAACTAA 390 0.5026 MACMWLKNACGGGSGNKKPPPPADVPRGHLAVMVGEAKRRFVIRADYLNHPLLQQLLDQYEGNFGFNKSGPLAIPCDEYLFEDIIQALRDGTSSSSSSSHVPLKKLDLSKDSMPLLQADGFDGKRRSTN 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03152 129 Pfam Auxin responsive protein 21 88 IPR003676 GO:0009733
Pumo3g03152 129 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 18 84 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03152 Pumo-Chr3 58015522 58015916 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03152 1 116 Calmodulin-binding Proteins AT4G34750 46.565 2.39e-29 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03152 K14488 - gmx:100777611 186.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g03152 3 58015522 58015916 Pumo3g03152 3 58015522 58015916 ECH