Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03145 ATGATGGAAATGCCTGCCAGAAGATCCAACTACTCGCTCCTCAGCCAAATTCCCGACGACCAGTTCTCCGCCGCCGCCGCCGCACCCTCCTCCTCCGGCGACGGCAAGGGTGGCCGCGCCGGAAAGTCCGACCGCGCCTTCGACTGGGACCTCGTCGCCGATCACCGGGCGGCGCAGCAGGCCGCCAACCGGATCGGAAACCTCTACTCCTCGATCGGCCTGCAGCGCCAGTCCAGCGGGAGCAGCTACGGCGAGAGCTCGCTCTCTGGCGGCGGCGACTTCTACGCTCCGACGCTCTCCACTGCGGCGGCCAGCGACGTCGACGCCTTCGGCTACCTCCACGACGAGCGGAGCAAGTTCTCGGAGGCTCCGGCGAGGATCGCAGGCTCCTTCGGGAAGAGCTGGGCGCAGCAGACGGAGGAGAGCTACCAGCTGCAGCTCGCGCTCGCGCTGCGCCTCTCGTCGGACGCCACGTGCGCCGATGATCCCAATTTCCTCGATCCGATGCCGGACGACGCCGCGCTACGGCTCTCGTCGTCGGCCGAGGCGGTTTCGCATAGGTTTTGGGTTAATGGCTGCCTATCATACTCCGACAAAATTCCAGATGGCTTTTACCTAATTCACGGGATGGATTCCTTTGTCTGGACTGTGTGCACTGATCTGCATGAAAATGGCCGAATTCCATCAGTTGATATGCTGAAGTCGGTGAATCCCTGCATCGTTTCTTCACTCGAAGTAGTTTTGGTGGATCGACGCAGTGACCCCAGCTTAAGAGATCTGCAAAATAGTGTTCATAGCATTTCTTGTACTAGCATAACAACAACAGATGTTGTAGATAAGCTTTCCAAGCTGGTTTGCAACCGTATGGGGGGTTCAGCTTCTGTTGGGGAAGATAACTTTTTTCCCATCTGGAGGGATTGCAGTAATGATCTGAAAGATTGCTTAGGATCTGTTGTTATTCCCATAGGTAGTCTATCTGTTGGCCTCTGCAGGCATCGTGCTATTTTATTCAAAGTACTAGCTGACGCCATTGATTTACCATGTCGAATTGCTAAGGGCTGTAAATATTGCAAAAGGGATGATGCTACATCTTGTCTTGTTCGATTTGGGCTTGAGAGGGAGTATCTTGTTGATTTAATTGGAAAGCCAGGAAACTTATCCGAGCCTGATTCCTTGCTCAATGGTCCATCTTCCATCTCATTTTCTTCACCCTTGCGCTTTCCACGACTTAAACCAGCTGAACCTACCATTGATTTCAGGTCACTGGCCAAACAGTATTTCTCGGACTGTGTGTCTCTTGAGCTTGTCTTCGACAGCAGTTCTGCAGAACATTTTGATGGGAAGTGCAAAGACAGGAATAACCCCAGGCCAATTTCAACTGACAGCAATAGAAGTTCTCACCTTCCTCTACATCCCCAAGATTCTCATCCAAGCACACGTGAACAAGGTTCTGAAACATATCAATCATGTAACCCTTCTCAGAACATTGTAGACTTGACTGTGGGAAAGTATCCACCACCAGTAAAGCATAAGCGTCCTGTTGGTATACCAACCCCGTTAGCACTTACAAATACTAATGATGACATGATTGAGGGCAAGAGGTTTGTTGAAGGAAGTCAACTGATGCCTAGCAAACCTACTCGAGAGCTTACCCTTGACATGGAGGATTTGGACATACCATGGAGTGATCTTGTTTTAAGAGAGAAAATAGGGTCAGGTTCTTTTGGAACTGTACATCGTGCTGAGTGGAATGGCTCGGATGTTGCTGTGAAAATTTTGATGGAACAGGATTTTCATGCTGAGCGCTTCCAGGAATTCCTAAGGGAGGTTGCAATAATGAAACGTTTACGGCATCCAAACATTGTTTTGTTTATGGGGGCAGTCACTCAGCCTCCTAACTTATCAATTGTCACAGAATATTTATCAAGGTTGTACTCCTCTACCTGTTCCTCATCCTTTTCCCTAAAAGAGGGGAGTTTTTCAAGGCTATAG 1992 0.502 MMEMPARRSNYSLLSQIPDDQFSAAAAAPSSSGDGKGGRAGKSDRAFDWDLVADHRAAQQAANRIGNLYSSIGLQRQSSGSSYGESSLSGGGDFYAPTLSTAAASDVDAFGYLHDERSKFSEAPARIAGSFGKSWAQQTEESYQLQLALALRLSSDATCADDPNFLDPMPDDAALRLSSSAEAVSHRFWVNGCLSYSDKIPDGFYLIHGMDSFVWTVCTDLHENGRIPSVDMLKSVNPCIVSSLEVVLVDRRSDPSLRDLQNSVHSISCTSITTTDVVDKLSKLVCNRMGGSASVGEDNFFPIWRDCSNDLKDCLGSVVIPIGSLSVGLCRHRAILFKVLADAIDLPCRIAKGCKYCKRDDATSCLVRFGLEREYLVDLIGKPGNLSEPDSLLNGPSSISFSSPLRFPRLKPAEPTIDFRSLAKQYFSDCVSLELVFDSSSAEHFDGKCKDRNNPRPISTDSNRSSHLPLHPQDSHPSTREQGSETYQSCNPSQNIVDLTVGKYPPPVKHKRPVGIPTPLALTNTNDDMIEGKRFVEGSQLMPSKPTRELTLDMEDLDIPWSDLVLREKIGSGSFGTVHRAEWNGSDVAVKILMEQDFHAERFQEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRLYSSTCSSSFSLKEGSFSRL 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03145 663 MobiDBLite consensus disorder prediction 458 498 - -
Pumo3g03145 663 FunFam Serine/threonine-protein kinase isoform 1 554 642 - -
Pumo3g03145 663 Gene3D Phosphorylase Kinase; domain 1 557 642 - -
Pumo3g03145 663 SUPERFAMILY Protein kinase-like (PK-like) 541 643 IPR011009 -
Pumo3g03145 663 ProSitePatterns Protein kinases ATP-binding region signature. 570 591 IPR017441 GO:0005524
Pumo3g03145 663 ProSiteProfiles Protein kinase domain profile. 564 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g03145 663 Pfam Ethylene-responsive protein kinase Le-CTR1 181 386 - -
Pumo3g03145 663 MobiDBLite consensus disorder prediction 23 42 - -
Pumo3g03145 663 Pfam Protein tyrosine and serine/threonine kinase 565 642 IPR001245 GO:0004672|GO:0006468
Pumo3g03145 663 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 89 643 - -
Pumo3g03145 663 MobiDBLite consensus disorder prediction 444 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03145 Pumo-Chr3 57869420 57876715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03145 2 643 MAP Kinase Kinase Kinase AT5G03730 58.309 0.0 654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Pumo3g03145 EDR1 2e-80 CL0125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03145 K14510 - gmx:100800648 1172.15