Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03134 ATGTTGTTGTTCCTGTCTCCGAGGTGGCTGGGATCCTGTGAGGTCGGGTTCACCTGTTCCTGCAATGGCAGGCCCAGTAGTGCTGTCTGGTCGGAGAGCAACGACTTGGAAAGTTCTAGTAGTGGCCACTCCTTTGATGACTCCGTTCAAGAGATTGAGTTTCTCAACAAACGCAAACAAAACGATGATCACGGCTTCTTCTGTGAAAGCCCTTTCCGTTTCTCCCTCCAATGGAACCCCGACTACTCCGGCCGCCACACGCCGGAATTTTCGTCGCCGGCAGCATCTCCTAGTCGCCACAGAACTCAGGACAAAGAAATTAACGGTGCTGATGGCGTCAACAAATTCCAATCAGGGGAAGAAGAGGAAGATAAGGAACAGTGTAGTCCAGTATCTGTTTTAGACCCACCCTTTGATGATGATGATGATGAAGATGTGCATGAAAATGACCATGCAGAGAATGGTTTTGATTTGGACTGTAGCTATGCCAATGTACAAAGAACCAAGCAGCATCTATTAGACAGGCTTCGTAGATTTGAGAAACTTGCAGAGTTAGATCCAGTAGAACTTGAGCAAAGAATGTTAGATCAAGAAGACATCGAGTATGAAACATTTATTGAAGAGGATGACTATGAAGATGTCGACAGCGAAACAACATGTGAAGAAATGTTTGAAATCCTCTGCCATTCAAGTGTTCAAGACACACAGCAAACCCCAGAAGACCTTAAGAGGCTGGTCTATGATCTCATCAAGGAGGAAGAGGCAGAAGCTAATTCTTTAGAAGAGAGGAACATGGTGATAAGAAGGGTTCTTAGGAGGCTGGAATTGTGGAGAGAAGTGGAGTCCAACACTATTGATATGATGATAGAAGAGGACTTCAATAGAGAGGAGGGTATGTGGAAGAAAAATGCTGAGCACACAAGGGAGCTAGCTGTGGAACTTGAACTTGCTATCTTTTGCTTTCTAGTGGAGGAGCTTTCAGAGGAACTAGTGTGTTAA 999 0.4515 MLLFLSPRWLGSCEVGFTCSCNGRPSSAVWSESNDLESSSSGHSFDDSVQEIEFLNKRKQNDDHGFFCESPFRFSLQWNPDYSGRHTPEFSSPAASPSRHRTQDKEINGADGVNKFQSGEEEEDKEQCSPVSVLDPPFDDDDDEDVHENDHAENGFDLDCSYANVQRTKQHLLDRLRRFEKLAELDPVELEQRMLDQEDIEYETFIEEDDYEDVDSETTCEEMFEILCHSSVQDTQQTPEDLKRLVYDLIKEEEAEANSLEERNMVIRRVLRRLELWREVESNTIDMMIEEDFNREEGMWKKNAEHTRELAVELELAIFCFLVEELSEELVC 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03134 332 Coils Coil 243 270 - -
Pumo3g03134 332 Coils Coil 162 182 - -
Pumo3g03134 332 PANTHER OS04G0572500 PROTEIN 19 330 - -
Pumo3g03134 332 MobiDBLite consensus disorder prediction 85 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03134 Pumo-Chr3 57652515 57656800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03134 67 331 TRM (TON1 Recruiting Motif) Superfamily AT2G36420 36.131 1.05e-23 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03134 - - gmx:100782984 478.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g03134 3 57652515 57656800 Pumo3g03134 3 57652515 57656800 ECH
Pumo5g03154 5 80401514 80405170 Pumo3g03134 3 57652515 57656800 PCT