Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03131 ATGGGTTCATTCTCTGGCACTTGTGAAATTGTTGAAGCAAGGGAAGACCTAAATACAGAGAAAGATGGAGGGATATATCAGTCCAATTCTGGATATAGCTTGGAAGAGAAAAATCAGAAGCATCCTGTGCTGAAACTGGGATATAAGGATAATCTAGATGAAGATATTAATAAGCTGTTTGAATCAATTACTCTTAAATCTTCATCAAGGGATTTGGGCTTTTTACAAGATGGTACAAGCCCTAAGATGAAAAGTGCATTGAAAAAACCAATTACAGTGGGTGCTTCTCGTTCCCCACGAGTTGGACCTTCTGAGCCTGTGACTTTGAAGCAGGCATTAAGAGACCTATGTATATCTAAGGCATCAGAAATGGCTGCCATGAAAAGATTATCAAAGTCAACTGCTTCTCCAAGAATATCTGAGGTTGGGAAGATACAGACATTGTACAATTCAGTTGTAGTTGAAGGTAGACGATCTGGACCTTCTAATGTTGAGAGTAAAGGGAGTACAAGTGAAATATCACCAGTGCCAGAAGAGAGCAACTCACTTGCCTTGGATAAAGCTTCCCAGTCTCATCCAACTGTTAAAAGCACATCACTGAGCCAAAATGTTCAATCTTCCAAAATTGCTGTTACAACTACACAAAATGATACTGGGGCTTCATTGATGCCAAGTGACTTGGCTAGTTCATCAAGTAAAGTTGGGGTTCTATCACAGTCATCAGAGCCGGCACAAATAGAAAAACAAACATCTGCATCTTCTCCATCTAGTTGCAACACCAATGGAAGTAAATTAGAGTTGCCCGAAAATGCTTCTTCCCCTAAAAAAATAGGAAATAAAGCATCTGTATCAAAGAATGGGCGGAAAGGTAGGTTACAAACAGTCTCTTCCTCATCTACTTCTGTAAATGGCAATAGAGTGTGCAAACTGTCACGCAATGCCCCTCGTACAGTCAAATCGATTATCAAGAACAAAAGTTTGGGTAAGAAAAAACTAAAGCAGGATTCAGTTCCTGCTTTATTTGATCCTACATCCAATGAAGTAAATAACAAGTCAGTTCCTGGAACAACTCAACTTGTTTGTGAGAGATGTTGGTGTGCTATAGAAAACAACAAAGGTATTATATCATTGGACTCTATCAGTCCTGGAGATGGAATAAACTCTGTTAATGTGCACTCTGGCTCAGCATCAGCTGGCTGTAATAGCAGCAGAGAAGTTACAAAAGTGAAAAAGAACACCGTATTGAAAGAGCAACTTGAATTTTCACAAAGTTCAAAGAGTAGCCAAGGTGACTACAGTAGTAGTACAAGTACCAGTGATGAGAGTAATCTCAGTGGGTCTAGTTGTGGCAATAGGCCTCACATGTCAAAGGATGTTAGATGGAAAGCCATACGAGATGCTCAAATGCAGGATGGAGTCTTGGGCTTGAGACACTTCAATCTTTTGAAGAAGCTAGGTTGTGGAGACATTGGGACTGTATATCTTGCTGAACTAATTGGCAAAAATTGTTTGTTTGCTATTAAGGTGATGGACAATGAATTTTTGGCAAGAAGGAAGAAGATGCCTAGGGCTCAAACTGAAAGAGAAATATTAAGGATGCTGGATCATCCTTTTCTTCCAACACTGTATGCGCAGTTCACATCAGATAATTTGTCATGTCTGGTCATGGAGTATTGTCCAGGTGGTGATCTTCATGTTCTACGGCAGAAGCAGCTTGGCAGAAGTTTTTCAGAGCCAGCAGCAAGGTTTTATGTTGCTGAAGTCCTTCTTGCTCTGGAGTACTTGCACATGCTTGGAGTGGTTTACCGTGATTTGAAACCTGAAAACATTCTTGTTCGAGAAGACGGCCACATTATGCTCACAGATTTTGATCTGTCACTGAGGTGTGATGTTAACCCAACACTTCTGAAGTCATCTTCCGATGTGGATCCGGCTAAGATTTCTGGTCCTTGTGCACAATCAAGTTGCATTGAGCCATTCTGTATTGAACCAGCCTGTCAAGTTCCATGCTTCAGCCCTAGACTCCTACCTCCTGCCGCAAAAGCAAGGAAATTAAAAACTGATCTTGCTGCTCAGCTCAGATCGTTGCCACAGCTCGTGGCCGAGCCCACAGATGCAAGATCAAATTCATTTGTTGGTACTCATGAATACTTGGCGCCCGAGATCATCAAAGGAGAAGGACATGGAGCTGCAGTTGACTGGTGGACATTTGGTGTTTTTCTCTATGAGCTTTTATACGGTAGAACACCCTTTAAAGGTTCTAATAATGAAGAAACGTTAGTCAACGTGGTGTTGCAAGGTCTCAGATTCCCCGACAGCCCGATGGTTAGTTTGCCAGCGAGGGATCTCATTAGAGGGTTGTTGGTTAAAGAGCCTGAAAACCGTTTGGGTTCAGAGAAAGGTGCTGCTGAGATAAAACAGCACCCCTTCTTCGAAGGCCTTAATTGGGCGTTAATACGTTGCGCTATCCCACCAGAACTGCCAGATTTATGCGAGTTTGGAGTTTCAGAGATGACCCCACAGTCCCAGGGCATGGGTGTTAAGTATGTAGAGTGTAACGCAGCAGGAAAGCTAGTGGAATTTGAGTTGTTTTGA 2595 0.4208 MGSFSGTCEIVEAREDLNTEKDGGIYQSNSGYSLEEKNQKHPVLKLGYKDNLDEDINKLFESITLKSSSRDLGFLQDGTSPKMKSALKKPITVGASRSPRVGPSEPVTLKQALRDLCISKASEMAAMKRLSKSTASPRISEVGKIQTLYNSVVVEGRRSGPSNVESKGSTSEISPVPEESNSLALDKASQSHPTVKSTSLSQNVQSSKIAVTTTQNDTGASLMPSDLASSSSKVGVLSQSSEPAQIEKQTSASSPSSCNTNGSKLELPENASSPKKIGNKASVSKNGRKGRLQTVSSSSTSVNGNRVCKLSRNAPRTVKSIIKNKSLGKKKLKQDSVPALFDPTSNEVNNKSVPGTTQLVCERCWCAIENNKGIISLDSISPGDGINSVNVHSGSASAGCNSSREVTKVKKNTVLKEQLEFSQSSKSSQGDYSSSTSTSDESNLSGSSCGNRPHMSKDVRWKAIRDAQMQDGVLGLRHFNLLKKLGCGDIGTVYLAELIGKNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYAQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRSFSEPAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCDVNPTLLKSSSDVDPAKISGPCAQSSCIEPFCIEPACQVPCFSPRLLPPAAKARKLKTDLAAQLRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLVNVVLQGLRFPDSPMVSLPARDLIRGLLVKEPENRLGSEKGAAEIKQHPFFEGLNWALIRCAIPPELPDLCEFGVSEMTPQSQGMGVKYVECNAAGKLVEFELF 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03131 864 FunFam Serine/threonine-protein kinase D6PK-like 477 562 - -
Pumo3g03131 864 SUPERFAMILY Protein kinase-like (PK-like) 455 829 IPR011009 -
Pumo3g03131 864 MobiDBLite consensus disorder prediction 275 305 - -
Pumo3g03131 864 MobiDBLite consensus disorder prediction 157 305 - -
Pumo3g03131 864 MobiDBLite consensus disorder prediction 420 452 - -
Pumo3g03131 864 Gene3D Transferase(Phosphotransferase) domain 1 559 627 - -
Pumo3g03131 864 ProSitePatterns Serine/Threonine protein kinases active-site signature. 600 612 IPR008271 GO:0004672|GO:0006468
Pumo3g03131 864 Gene3D Transferase(Phosphotransferase) domain 1 704 826 - -
Pumo3g03131 864 SMART serkin_6 479 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g03131 864 Pfam Protein kinase domain 708 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g03131 864 Pfam Protein kinase domain 480 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g03131 864 PANTHER FLIPPASE KINASE 1-RELATED 213 832 - -
Pumo3g03131 864 FunFam serine/threonine-protein kinase D6PK-like 706 829 - -
Pumo3g03131 864 MobiDBLite consensus disorder prediction 157 268 - -
Pumo3g03131 864 CDD STKc_phototropin_like 477 830 - -
Pumo3g03131 864 MobiDBLite consensus disorder prediction 420 454 - -
Pumo3g03131 864 ProSiteProfiles Protein kinase domain profile. 479 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g03131 864 Gene3D Phosphorylase Kinase; domain 1 477 558 - -
Pumo3g03131 864 FunFam serine/threonine-protein kinase D6PK-like 563 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03131 Pumo-Chr3 57592012 57596704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03131 1 864 AGC Kinase Gene Family AT2G36350 51.817 0.0 845
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pumo3g03131 Pkinase 5.7e-36 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g03131 3 57592012 57596704 Pumo5g03162 5 80551242 80556484 ECH
Pumo3g03131 3 57592012 57596704 Pumo3g03131 3 57592012 57596704 ECH
Pumo5g03162 5 80551242 80556484 Pumo3g03131 3 57592012 57596704 PCT