Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03129 ATGAAGGTGGTCGCTGCGTATTTGCTCGCCGTCCTCGGTGGCAACAACAGCCCCTCCGCCGATGTCATCAAGGAAATTCTTGGCTCCGTTGGAGCAGAAGCAGATGATGATAGGATTGAGCTATTTTTGTCTGAAGTTAAGGGTAAGGATATAGTTGAGGTTATTGCTGCCGGTAGGGAAAAGCTGGCCTCAGTGCCTTCTGGTGGTGGTGGTGCTGTTGCCGGTCGCCGCTGCTCCTGGGGGAGGTGGTGCTGCTGCTGCCCCAGCTGCAGAGGCAAAGAAAGAGGAAAAAGTGGAGGAGAAAGAGGAATCTGA 315 0.5397 MKVVAAYLLAVLGGNNSPSADVIKEILGSVGAEADDDRIELFLSEVKGKDIVEVIAAGREKLASVPSGGGGAVAGRRCSWGRWCCCCPSCRGKERGKSGGERGI 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03129 104 Gene3D - 1 59 IPR038716 -
Pumo3g03129 104 FunFam 60S acidic ribosomal protein P2 1 59 - -
Pumo3g03129 104 Pfam 60s Acidic ribosomal protein 17 73 - -
Pumo3g03129 104 CDD Ribosomal_P2 1 67 IPR044076 GO:0002182|GO:0003735|GO:0022625
Pumo3g03129 104 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 1 74 IPR044076 GO:0002182|GO:0003735|GO:0022625
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03129 Pumo-Chr3 57551297 57553104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03129 1 70 Cytoplasmic Ribosomal Protein Gene Family AT2G27710 75.714 1.36e-30 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03129 K02943 - gmx:100499761 126.331