Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03118 ATGACCTCATTCTCATCGCGCCGCACTACGACATTGGGTTTCCCATCTTTCATCGCTTCAGTGGTTAATCAAATTGCCACCAACTTGCTCCGTATCCAAAAGTTGGGAGTGAGGAAAATTGTTGTGGGTGGTCTACAACCCCTTGGATGTCTTCCTCAAACCACAGCACCATCTTCATTCCAGCAATGTAATAGCACCTCCAACGACCTCGTAGGTCTCCACAACAACCTGTTGAACCAAGTTGTGACCAAGTTGAACCAACAAACCAAGGATCACTCCACCTTCATAGTTCTTGACCTCTACGATAGTTTCATGTCAGTGTTAAACCACACATCTACCAATAACATTATGGACCCCCTCAAGCCTTGTTGTGTTGCGTTAAGGAGCCAAGATTTTTGTGGGAGCGTGGATGAGAACAATGTTAAGCAATATAAGGTTTGTGACAATCCCAAATCAGCTTTCTTTTGGGATCTCTTGCACCCAACTCAAGCAGGTTGGCAAGCTGTGTATAACAAGTTGCAAACCACTAGAGCTCTTCAACAAATCAGGTACTAG 555 0.4468 MTSFSSRRTTTLGFPSFIASVVNQIATNLLRIQKLGVRKIVVGGLQPLGCLPQTTAPSSFQQCNSTSNDLVGLHNNLLNQVVTKLNQQTKDHSTFIVLDLYDSFMSVLNHTSTNNIMDPLKPCCVALRSQDFCGSVDENNVKQYKVCDNPKSAFFWDLLHPTQAGWQAVYNKLQTTRALQQIRY 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03118 184 SUPERFAMILY SGNH hydrolase 21 173 - -
Pumo3g03118 184 Pfam GDSL-like Lipase/Acylhydrolase 17 172 IPR001087 GO:0016788
Pumo3g03118 184 Gene3D SGNH hydrolase 3 181 IPR036514 -
Pumo3g03118 184 PANTHER OSJNBB0059K02.9 PROTEIN 6 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03118 Pumo-Chr3 57052214 57053158 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03118 10 164 Acyl Lipid Metabolism Gene Families AT4G10950 25.478 7.79e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03118 - - gmx:100789208 300.441
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03168 5 80637935 80642354 Pumo3g03118 3 57052214 57053158 PCT