Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03117 ATGATGGACTCGCACAAGCAACTATTTTCCCTCTCATGTCTTCCCCTACTACTTCTACTTCTACTTCTCTCAGGACATATGGGGCTGCAATTAACTGAGGCTCGGTTGCAGCGTCATGAGAAGAATTATTCCCCGAAAACGTTGTTTGTTTTTGGGGACTCGTATGTTGATACCGGGAACTATAGAATAGATCAAGCTACTGGGTCGTGGAAAGACCCTTATGGCATAACTTTTCCCGGAAAACCAGCCGGTAGATTCTCCGATGGTAGAGTTCTAACCGATTACATTGTGGTTAATCAAACTGCCACCAACTTGCTCCGTATCCAAAAGTTAGGAGTGAGGAAAATTGTTGTGGGTGGTCTACAACCCCTTGGATGTCTTCCTCAAACCACAGCACCATCTTCATTCCAACAATGTAATAGCACCTCCAACGACCTCGTAGGTCTCCACAACAACCTATTGAACCAAGCCGTGACCAAGTTGAACCAACAAACCAAGGATCACTCCACCTTCATAGTTCTTGACCTCTACGACAGTTTCATGTCAGTGTTGAACCACACATCTACCAATAACATTAAGGACCCCCTCAAGCCTTGTTGTGTTGGGTTAAGCAGCCAAGATTTTTGTGGGAGCGTGGATGAGAACAAAGTTAAGCAATATAAGGTTTGTGACAATCCCAAATCAGCTTTCTTTTGGGATCTCTTGCACCCAACTCAAGCAGGTTGGCAAGCTGTGTATAACAAGTTGCAAACCACGAGTGCTCTTCATCAAATTAGGTACTAG 783 0.4457 MMDSHKQLFSLSCLPLLLLLLLLSGHMGLQLTEARLQRHEKNYSPKTLFVFGDSYVDTGNYRIDQATGSWKDPYGITFPGKPAGRFSDGRVLTDYIVVNQTATNLLRIQKLGVRKIVVGGLQPLGCLPQTTAPSSFQQCNSTSNDLVGLHNNLLNQAVTKLNQQTKDHSTFIVLDLYDSFMSVLNHTSTNNIKDPLKPCCVGLSSQDFCGSVDENKVKQYKVCDNPKSAFFWDLLHPTQAGWQAVYNKLQTTSALHQIRY 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03117 260 PANTHER OSJNBB0059K02.9 PROTEIN 20 96 - -
Pumo3g03117 260 Gene3D SGNH hydrolase 98 255 IPR036514 -
Pumo3g03117 260 Gene3D SGNH hydrolase 35 97 IPR036514 -
Pumo3g03117 260 SUPERFAMILY SGNH hydrolase 44 249 - -
Pumo3g03117 260 Pfam GDSL-like Lipase/Acylhydrolase 105 248 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03117 Pumo-Chr3 56971088 56975240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03117 75 249 Pollen Coat Proteome AT1G75910 23.757 1.23e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03117 - - gmx:100800932 298.13