Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03110 ATGATGGACTCGCACAAGCAACTATTTTCCCTCTCATGTTTTCCCCTACTACTTGTACTTCTCTCAGGACTTATGGGGCTGCAAATAACTGAGGCACGCTTGCAACGTGATGAGATGAAGTATCCCCCGAAAACGTTTTTCGTTTTCGGGGATTCCTATGTTGATACCGGAAACACGAGAATAGATCAACGTGGGTCGTGGAAAAACCCTTATGGTATAACTTTTCCCGGAAAACCAGCCGGAAGATTCTCCGATGGTAGAGTTCTAACCGATTACATTGCTAAGTATTTGGGACTCAAATCGCCAGTTCCCTATAAATTTAGGAAACTGATGCAGCAACAATTGAAATCTGGGATGAATTTTGCATATGGTGGTACCGGTGTGTTTGACACATCCTCCAAAAACCCAAATATGACAATCCAAATCGATTTCTTCAAGCATTTGATCAAAGAAAATGTGTACACCACCTCTGATCTCAACAACTCAGTGGCCCATGTCTCCGTCGCTGGAAATGATTACAGTTTCTACATGGCCACAAATGGCTCTATTGAGGGTTTCCAGTCTTTCATCGCCTCAGTGGTTAATCAAACAGCCACCAACTTGCTTCGAATCCAAAGGTTAGGAGTGAGGAAAATTGTTGTGGGTGGTCTACAACCCCTTGGATGTCTTCCTCAAACCACAGTCACATCTTCATTTCAACAATGTAATAGTACCTTCAACGACCTCGTAGGTCTCCACAACAACCTATTGAACCAAGCTGTGACCAAGTTGAACCAACAAACCAAGGATCACTCCACCTTCATAGTTCTTAACCTTTATGACAGTTTCATGTCAGTGCTGAACCACCCATCTACCAATAACATTAAGGACCCGCTCAAGCCTTGCTGCGTTGGGTTAAGTGACCAATATATTTGTGGGAGCGTGGATGAGAACAATGTTAAGCAATATAAGGTTTGTGACAATCCCAAATCAGCTTTCTTTTGGGATCCCTTGCACCCAACTCAAGCAGGTTGGCATGCCGTGTATAACAAGTTGCAAACGATGAGTGTTCTTCATGATTACTATTTCTAG 1071 0.4314 MMDSHKQLFSLSCFPLLLVLLSGLMGLQITEARLQRDEMKYPPKTFFVFGDSYVDTGNTRIDQRGSWKNPYGITFPGKPAGRFSDGRVLTDYIAKYLGLKSPVPYKFRKLMQQQLKSGMNFAYGGTGVFDTSSKNPNMTIQIDFFKHLIKENVYTTSDLNNSVAHVSVAGNDYSFYMATNGSIEGFQSFIASVVNQTATNLLRIQRLGVRKIVVGGLQPLGCLPQTTVTSSFQQCNSTFNDLVGLHNNLLNQAVTKLNQQTKDHSTFIVLNLYDSFMSVLNHPSTNNIKDPLKPCCVGLSDQYICGSVDENNVKQYKVCDNPKSAFFWDPLHPTQAGWHAVYNKLQTMSVLHDYYF 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03110 356 CDD SGNH_plant_lipase_like 45 345 IPR035669 -
Pumo3g03110 356 Pfam GDSL-like Lipase/Acylhydrolase 47 344 IPR001087 GO:0016788
Pumo3g03110 356 Gene3D SGNH hydrolase 35 350 IPR036514 -
Pumo3g03110 356 PANTHER OSJNBB0059K02.9 PROTEIN 22 347 - -
Pumo3g03110 356 SUPERFAMILY SGNH hydrolase 42 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03110 Pumo-Chr3 56594198 56598145 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03110 45 341 Pollen Coat Proteome AT1G75930 27.900 3.29e-28 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03110 - - gmx:100789208 607.446