Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03100 ATGGTGGTGCCTGAGTCCGAAATGAATTCCCAAAACGAGGTGGAATCGCCGCTACAATTGGAGCAGCAGCAACAACAACACATGTACAGCAACAGGAACCATCCATTCTCATCACTGGGAAGACAATCCTCAATATACTCCCTCACCCTCGACGAGTTCCAGCACACGCTATGGGAGAGTGGCAAGAACTTCGGGTCGATGAACATGGACGAGTTCCTCAGCAGCATATGGAGTGCAGAAGAGAATCAAGTTTTGAACAGCAACAACAATCACAGCCACAACAACAACATGATCAACGACTTGTCGCTGAGTGAAGCCTCCACTGAGAAAGGTGTGATAAGGAAGCAACCGAGCCTTCCTCGGCAAGGGTCTCTAACGCTTCCTGCACCTTTGAGTAGGAAAACAGTGGACGAGGTTTGGTCTGAGATACACAAAGGACAACAATCTCAACAGCAGCAAAACAGCAACACTAACAACAATTGTGGCAGTGCCGGTAATAATAATAATAGTGTGCAGAATACCGAATCTGCCCCTCGCCAACCTACTTTTGGAGAGATGACTTTGGAGGATTTCTTGGTTAAAGCTGGGGTAGTTAGGGAACAGTGTGCAATGGCTGCAGCTGCAATGGCGCCTGTACAAGCTTCATCACATCAGCATATGCAGCAGTATGGCATGTATCCAAATAGCAACCCTGCAATGGGGCCTTCTTTTGTCGGTAGGCCGGTGATGGGGATGGCCGGCGGCGTCGGTGGTGGTGGCGGTGGGAATGTGGTTGCACCGCCTTATCAGGCGGTGGCTCAGGGTGGTGTTGGTGTTGGTGGTGGTGGTGCAATTGGGGAGTCTTCTGGGTATGCTGGAAATGGAAAGAGGGATGCCGGGTATCCACCGGCGGCGAGTGTTTGCTTTGGAGGGAGGGTGGTGAATGGTGGCGGTGGTTATGGGGCGGTGAGTAATATGGGAATGGTGGCGCCGGTGAGCCCAGTTTCACCGGAGGGGATAGGAACCGGTGAAAATTCCTGTGGTCAGTTTGGGATGGACATGGGTGTGTTGAGAGGGAGAAAGAGGGTGTTGGATGGTCCTGTGGAGAAGGTGGTGGAGAGAAGGCAGAGGAGGATGATCAAGAACAGAGAATCAGCAGCCAGATCTAGAGCAAGAAAACAGGCTTACACCGTTGAATTAGAAGCAGAATTGAACCAATTAAAAGAAGAGAATGCCCAACTTAAACTAGCTCTGGCCGATCTTGAGAGGAGAAGAAAGCAACAGTATTTAGAGGAAGTGAATGGAAAAGTTCAAACCAACGCTCAGAAGGCCAAAAAGAAATTGAGATCATTGAGAAAGACCCTAAGTTGCCCTTTATGA 1359 0.4989 MVVPESEMNSQNEVESPLQLEQQQQQHMYSNRNHPFSSLGRQSSIYSLTLDEFQHTLWESGKNFGSMNMDEFLSSIWSAEENQVLNSNNNHSHNNNMINDLSLSEASTEKGVIRKQPSLPRQGSLTLPAPLSRKTVDEVWSEIHKGQQSQQQQNSNTNNNCGSAGNNNNSVQNTESAPRQPTFGEMTLEDFLVKAGVVREQCAMAAAAMAPVQASSHQHMQQYGMYPNSNPAMGPSFVGRPVMGMAGGVGGGGGGNVVAPPYQAVAQGGVGVGGGGAIGESSGYAGNGKRDAGYPPAASVCFGGRVVNGGGGYGAVSNMGMVAPVSPVSPEGIGTGENSCGQFGMDMGVLRGRKRVLDGPVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAELNQLKEENAQLKLALADLERRRKQQYLEEVNGKVQTNAQKAKKKLRSLRKTLSCPL 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03100 452 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 370 385 IPR004827 GO:0003700|GO:0006355
Pumo3g03100 452 SMART brlzneu 363 429 IPR004827 GO:0003700|GO:0006355
Pumo3g03100 452 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 365 417 IPR004827 GO:0003700|GO:0006355
Pumo3g03100 452 Coils Coil 427 447 - -
Pumo3g03100 452 Gene3D - 365 416 - -
Pumo3g03100 452 MobiDBLite consensus disorder prediction 142 181 - -
Pumo3g03100 452 FunFam protein ABSCISIC ACID-INSENSITIVE 5 isoform X1 365 421 - -
Pumo3g03100 452 CDD bZIP_plant_BZIP46 367 421 - -
Pumo3g03100 452 Coils Coil 383 424 - -
Pumo3g03100 452 MobiDBLite consensus disorder prediction 1 36 - -
Pumo3g03100 452 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 40 451 IPR043452 GO:0003700|GO:0045893
Pumo3g03100 452 MobiDBLite consensus disorder prediction 108 130 - -
Pumo3g03100 452 SUPERFAMILY Leucine zipper domain 367 414 IPR046347 GO:0003700|GO:0006355
Pumo3g03100 452 Pfam bZIP transcription factor 367 414 IPR004827 GO:0003700|GO:0006355
Pumo3g03100 452 MobiDBLite consensus disorder prediction 432 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03100 Pumo-Chr3 56479345 56482478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03100 1 421 bZIP Transcription Factor Family AT2G36270 49.127 3.40e-110 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo3g03100 bZIP_1 2.7e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03100 K14432 - gmx:100790948 601.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03181 5 80793530 80795948 Pumo3g03100 3 56479345 56482478 PCT