Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03052 ATGATTCGCGGCCTGCGTTCGGACCGGCTTTTCTTCGAACCGGACGAGGCAAGCTCCATATTAGAGGCCAAAACGACGGGCCTCATCGTGCCGTTCAAGAACAGCGTCGTTTTGACGATGGACTCGGAGGACCCTTACGCGGATTTCCGAAAGTCCATGGAGGAGATGGTTGAGACTCTCGGCGTCGAAGACTGGGAGAGTCTCGAGGACCTTCTGTGCTGGTACTTGAAGGCCAATGCGAAGAGCAACCAAGAGTATATCGTTGGCGCTTTCGTTGATCTGTTGTTCGATCTCGCGTTCCATAATTCACTTTGCTCAGAAGACCAAGACCAACATTCTCATTCTCATTCTCATTCTCGCCCTTCTTCTCCTCTATCGTTTTATAGTTCTTCTTCTCCCTCTTCTTCTTGCAGCAGTACTCGCTGCGTTTATTGTATAAAAGATGAAGCGGAGGAGGAGGTTGGTGCTTCTGGTTCTTCTTTTTCTTTAGCACAGGTTAAGGATGAGATTACACCTGCAGATGAAGCTTCTTCATCTTCTAACAACTGA 549 0.4845 MIRGLRSDRLFFEPDEASSILEAKTTGLIVPFKNSVVLTMDSEDPYADFRKSMEEMVETLGVEDWESLEDLLCWYLKANAKSNQEYIVGAFVDLLFDLAFHNSLCSEDQDQHSHSHSHSRPSSPLSFYSSSSPSSSCSSTRCVYCIKDEAEEEVGASGSSFSLAQVKDEITPADEASSSSNN 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03052 182 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 8 99 IPR038933 GO:0045892
Pumo3g03052 182 MobiDBLite consensus disorder prediction 110 139 - -
Pumo3g03052 182 ProSiteProfiles OVATE domain profile. 38 97 IPR006458 -
Pumo3g03052 182 NCBIfam uncharacterized plant-specific domain TIGR01568 37 98 IPR006458 -
Pumo3g03052 182 MobiDBLite consensus disorder prediction 118 139 - -
Pumo3g03052 182 Pfam Transcriptional repressor, ovate 42 98 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03052 Pumo-Chr3 55505916 55506904 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pumo3g03052 Ovate 7.7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03052 - - gmx:100816044 210.305