Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03051 ATGTCCAGTTCCAGAAAAAAACTGGTTCTGAACACCGTGTCCGTGAGCCTGGGCTGCGGCAGCTGCCGAAGGCCCAGGCTCCTCCGGCACATATTCCACCGGAAGCGGAGGCCCAAGAAGCCCGCCTACCAGGCCCACGGGCATCATTGGGACGACACCGCGACGAGCACCACCACCACCAACACTCCCTCCGCCGCCACGTTCTCGCCCTGCTACGCCGAGGCCTCGGCGCAGTTCTGCAACTACGCCGAGACTGCGAGGGCGTTCGGGCGAGGCGTGGCGGTGGAGAAGGACTCTGATGATCCTTACCTGGACTTCAGGCACTCCATGCTGCAGATGATACTGGAGAACGAGATATACTCCAAGGACGATCTCAGGGAGCTTCTCAACTGTTTTCTTCAGCTCAACTCGCCGGACCACCATGGAGTGATAGTGAGAGCCTTCACTGAGATCTGGAATGGAGTTTTCTCTCTGAGGTCTGGTTCTTCCACTGGGTTCCACCTCAACCGTAAGTCACGTGACTTCTAG 528 0.5852 MSSSRKKLVLNTVSVSLGCGSCRRPRLLRHIFHRKRRPKKPAYQAHGHHWDDTATSTTTTNTPSAATFSPCYAEASAQFCNYAETARAFGRGVAVEKDSDDPYLDFRHSMLQMILENEIYSKDDLRELLNCFLQLNSPDHHGVIVRAFTEIWNGVFSLRSGSSTGFHLNRKSRDF 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03051 175 MobiDBLite consensus disorder prediction 36 59 - -
Pumo3g03051 175 Pfam Transcriptional repressor, ovate 99 155 IPR006458 -
Pumo3g03051 175 NCBIfam uncharacterized plant-specific domain TIGR01568 93 153 IPR006458 -
Pumo3g03051 175 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Pumo3g03051 175 ProSiteProfiles OVATE domain profile. 95 154 IPR006458 -
Pumo3g03051 175 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 65 156 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03051 Pumo-Chr3 55473449 55474521 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pumo3g03051 Ovate 2.7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03051 - - gmx:100786450 315.849
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g03051 3 55473449 55474521 Pumo3g03051 3 55473449 55474521 ECH