Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo3g03051 | ATGTCCAGTTCCAGAAAAAAACTGGTTCTGAACACCGTGTCCGTGAGCCTGGGCTGCGGCAGCTGCCGAAGGCCCAGGCTCCTCCGGCACATATTCCACCGGAAGCGGAGGCCCAAGAAGCCCGCCTACCAGGCCCACGGGCATCATTGGGACGACACCGCGACGAGCACCACCACCACCAACACTCCCTCCGCCGCCACGTTCTCGCCCTGCTACGCCGAGGCCTCGGCGCAGTTCTGCAACTACGCCGAGACTGCGAGGGCGTTCGGGCGAGGCGTGGCGGTGGAGAAGGACTCTGATGATCCTTACCTGGACTTCAGGCACTCCATGCTGCAGATGATACTGGAGAACGAGATATACTCCAAGGACGATCTCAGGGAGCTTCTCAACTGTTTTCTTCAGCTCAACTCGCCGGACCACCATGGAGTGATAGTGAGAGCCTTCACTGAGATCTGGAATGGAGTTTTCTCTCTGAGGTCTGGTTCTTCCACTGGGTTCCACCTCAACCGTAAGTCACGTGACTTCTAG | 528 | 0.5852 | MSSSRKKLVLNTVSVSLGCGSCRRPRLLRHIFHRKRRPKKPAYQAHGHHWDDTATSTTTTNTPSAATFSPCYAEASAQFCNYAETARAFGRGVAVEKDSDDPYLDFRHSMLQMILENEIYSKDDLRELLNCFLQLNSPDHHGVIVRAFTEIWNGVFSLRSGSSTGFHLNRKSRDF | 175 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo3g03051 | 175 | MobiDBLite | consensus disorder prediction | 36 | 59 | - | - | |
Pumo3g03051 | 175 | Pfam | Transcriptional repressor, ovate | 99 | 155 | IPR006458 | - | |
Pumo3g03051 | 175 | NCBIfam | uncharacterized plant-specific domain TIGR01568 | 93 | 153 | IPR006458 | - | |
Pumo3g03051 | 175 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 19 | - | - | |
Pumo3g03051 | 175 | ProSiteProfiles | OVATE domain profile. | 95 | 154 | IPR006458 | - | |
Pumo3g03051 | 175 | PANTHER | TRANSCRIPTION REPRESSOR OFP7-RELATED | 65 | 156 | IPR038933 | GO:0045892 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo3g03051 | Pumo-Chr3 | 55473449 | 55474521 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | OFP | Pumo3g03051 | Ovate | 2.7e-24 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo3g03051 | - | - | gmx:100786450 | 315.849 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pumo3g03051 | 3 | 55473449 | 55474521 | Pumo3g03051 | 3 | 55473449 | 55474521 | ECH |