Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03032 ATGGCGGATACGCAACCGCAGCGAAACGACGCCATTCCTTCGAAGGAGCGCCTCCGCACAAGATGCTGCTACTGCCTCTGCCAAATCTTCTGGATCTTTCTAGTTCTAATAATCATCATCGTCATGGTGGCGATCTTAGTCTTGTACATCATCATCACACCGCGCTCCTTCATGTTCCACGTCACCAACGCAAACCTCAAACAATTCGACTACGCCGCCAACAACAGCACTCTCTACTACAACCTCGTCCTCAACATCACCGCGCGCAACCCCAACAAGAGGCTCAAGATCTACTACGACGTCGTTCGGGCCAGCGCACTCTACGAGGGGGTCAGGTTCTCCACCGCCGACGTCAGCATGCCCTGGAACGGCTACCTTCAGGACAAGAAGGGCGCGAACCGCTTCAGCGCTGTTTTCACCGGACAACGTGTGACGGTGCTAAATCGAAACCAGGTTTCTCAGTTCGACGAAGATAAGAAAGATGGGGTTTTCGCTATTGATATTAAGATTCGTTTTACTATGAGGTTCAGGCTTGATGGTCTTCAGTTTGGGTACTACTATCCCAGAGGCGTGTGTGAGCTCAAGGTCCCGTTGACTTCTAATGGGAGAAAGGTGGCTCCGTTTGACCCCGCCAAATGCGTAATAGATTTCTGA 654 0.5153 MADTQPQRNDAIPSKERLRTRCCYCLCQIFWIFLVLIIIIVMVAILVLYIIITPRSFMFHVTNANLKQFDYAANNSTLYYNLVLNITARNPNKRLKIYYDVVRASALYEGVRFSTADVSMPWNGYLQDKKGANRFSAVFTGQRVTVLNRNQVSQFDEDKKDGVFAIDIKIRFTMRFRLDGLQFGYYYPRGVCELKVPLTSNGRKVAPFDPAKCVIDF 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03032 217 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 15 197 - -
Pumo3g03032 217 Pfam Late embryogenesis abundant protein 85 180 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03032 Pumo-Chr3 54994119 54994870 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03032 59 199 SNARE and Associated Proteins AT1G32270 33.333 2.01e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03032 - - gmx:100787531 311.997