Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03018 ATGACCGGGTGTTCGGTTGTGGATCCGTGGGCTGCGATCATATGTGGGTTTGTGGCTGCTTGGGTGCTTATTGGGTGCAACTTGCTGGCGGAGAAGTTGAAGTATGATGACCCTCTCGAGGCTGCACAGCTTCATGGTGGGTGTGGGACGTGGGGGCTTATCTTCACTGCTTTGTTTGCTAAGAAAGAGTATGTGAATGAGGTGTATCCGGGGCTACCTAATAGGCCTTATGGCCTATTGATGGGTGGGGGTGGAAAGTTGTTGGCTGCACATGTTGTTCAGATTTTGGCCATCACGGCTTGGGTGAGTGTCACAATGGGAGCAGTGTTCTTTGTGTTGCATAAACTGGACCTGCTGAGGACCCCACCTGATGAGGAGATGGAAGGGTTGGATGCAACCAGCCATGGTGGATTGGCATATGAGTTTCACGAAAAGGAAGAAAGGAAACTGGGATTTGGAGCAACTACTGTTTGA 474 0.5063 MTGCSVVDPWAAIICGFVAAWVLIGCNLLAEKLKYDDPLEAAQLHGGCGTWGLIFTALFAKKEYVNEVYPGLPNRPYGLLMGGGGKLLAAHVVQILAITAWVSVTMGAVFFVLHKLDLLRTPPDEEMEGLDATSHGGLAYEFHEKEERKLGFGATTV 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03018 157 Pfam Ammonium Transporter Family 2 140 IPR024041 GO:0008519|GO:0016020|GO:0072488
Pumo3g03018 157 Gene3D Ammonium transporter AmtB like domains 1 154 IPR029020 -
Pumo3g03018 157 PANTHER AMMONIUM TRANSPORTER 2 136 - -
Pumo3g03018 157 SUPERFAMILY Ammonium transporter 3 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03018 Pumo-Chr3 54667039 54667547 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g03018 2 147 Inorganic Solute Cotransporters AT1G64780 68.493 3.38e-72 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03018 K03320 - cave:132166278 247.284