Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02984 ATGGATAGAGAAATTGAAAGCACTGACATGAGCGATATGAGAGTTGATGCAATAGGTTTTCCTTGGGCAGTGGACAGTGCGATAAGGAGTAGGACTCCGTCAAATTTTGGAACATCTCCTATCCACAGATTTGCTTTGGTAGTGGACAATGCGATAAGGAGTGAGACTGCATCAAATTTTGGAACATTCCCTGTCCATGGTTATGCTTTAGCAGTGGACAACGCGATAAGGAGTGGGACTGCATCAAATCTTGAAACGTTCCCTGTCCATGGTTTTTCTTCGGCGGTGGACAACGCAATGAGGAGTAGTAGGACTGCGTCAAATTTTGGAACATCTCTTGTCCATGGTTTTGCTTCAGCAGAGGACACAAGTACAAGGACCGTTTCTGCACAATTGTTACAAGTGGTGTCGAACACGACCGGACATGGTGGTGCACGGTTATTCACCCTGGCTGAGCTTAAAGCAGCCACCGACAATTTCTCGCGTCACAACATCATAGGTGCTGGAAGCTTTGGTGTAGTGTACAGAGCCAACCTTGTTGATGGTCGTGAGGTCGCAATGAAGAGGGGTGGTGCCGGGTCACAGAGAATGGGTCCAGTTAAGTTTGAATTCGCCATCTTGTCCGGTCTTCTACACCACAAGCACTTGGTTGGGGTGGTTGGGTACTGTCAAGAGAAAAATGAGAGGCTCTTGGTGTATGAGTACATGAAGAATGGGTCGTTGTATGATCATTTGCATGCCAAGAACAATGTGCACAAGGGTAGCAGTGCGTTGAATTCGTGGAAAACGAGGATCAAGCTTGCTTTGGATGCTTCCCGGGGAATAGAATATCTTCATAACTATGATACAGTTCCACATATTCACCGAGATGTCAAGTCTTGCAACATTCTTCTTGATGCCACTTGGACAGCAAGAGTGTCTGATTTTGGGTCGTTGACCAAGGCATCTGGAACCGTTGGATACATCGATCCGGAGTGCTATGATGGTCTAAATGTGTTGACAGCAAAGAGTGATGTGTATGGGCTTGGAGTTGTACTTCTTGAACTTTTAACAGGAAAGAGGGCTATAGTAAAGTATGGGGAAGATGGAAGCACCCCATTACTAAGTGTGGTGGATGTTGCAGTGCCTGCTATTTTGGCTCAAGATATGGTGAAAATTTTGGATCCAAAGGTTGGACCACCGGATGTGAATGAAGCATTGGCAGTGGAGTTAGTGGCCTATACTGCTGTCCATTGTGTGAGTTTGAAAGGGAAAAATAGACCGACCATGGCTGACATTGTGCTCAATTTGGAGCGGGCTTTGGCTATTTGTAATAATAGTAGCCATGATAGCATTGCCAGCGGTACTATCTCTAATGTTTCAGAATGA 1368 0.4569 MDREIESTDMSDMRVDAIGFPWAVDSAIRSRTPSNFGTSPIHRFALVVDNAIRSETASNFGTFPVHGYALAVDNAIRSGTASNLETFPVHGFSSAVDNAMRSSRTASNFGTSLVHGFASAEDTSTRTVSAQLLQVVSNTTGHGGARLFTLAELKAATDNFSRHNIIGAGSFGVVYRANLVDGREVAMKRGGAGSQRMGPVKFEFAILSGLLHHKHLVGVVGYCQEKNERLLVYEYMKNGSLYDHLHAKNNVHKGSSALNSWKTRIKLALDASRGIEYLHNYDTVPHIHRDVKSCNILLDATWTARVSDFGSLTKASGTVGYIDPECYDGLNVLTAKSDVYGLGVVLLELLTGKRAIVKYGEDGSTPLLSVVDVAVPAILAQDMVKILDPKVGPPDVNEALAVELVAYTAVHCVSLKGKNRPTMADIVLNLERALAICNNSSHDSIASGTISNVSE 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02984 455 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 122 441 IPR044815 GO:0004674
Pumo3g02984 455 Gene3D Transferase(Phosphotransferase) domain 1 236 449 - -
Pumo3g02984 455 Pfam Protein kinase domain 161 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g02984 455 Gene3D Phosphorylase Kinase; domain 1 119 235 - -
Pumo3g02984 455 ProSiteProfiles Protein kinase domain profile. 160 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g02984 455 ProSitePatterns Protein kinases ATP-binding region signature. 166 188 IPR017441 GO:0005524
Pumo3g02984 455 SUPERFAMILY Protein kinase-like (PK-like) 137 430 IPR011009 -
Pumo3g02984 455 FunFam receptor-like protein kinase FERONIA 121 235 - -
Pumo3g02984 455 SMART serkin_6 160 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02984 Pumo-Chr3 53329462 53330829 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02984 145 455 Receptor kinase-like Gene Family AT3G55950 60.651 5.39e-114 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Pumo3g02984 Pkinase 3.6e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02984 - - gmx:100805573 431.024