Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02965 ATGGAGAAAGCAAATACATCACTAGTGAGAACAAAATCGGATCAGCTGGTGGAGTCAATGGTGGCGGCACTGAAGTCGCCGCCGTCGAGCGACCACTCCGCAAACGGAGCGGTGGAAGGCGGCGGAAACCTTTCGAGGAAGTCGAGCCGGCGGCTGACGGGGGCGTCGCCGGGGCGTGGCGGGAAGAACACGCACATAAGGAAGTCTAGGAGTGCTCAGATAAGTCAAATGAAGTTGGAGCTTGATGATGTGAGTAGTGGTGCTGCACTTAGTAGAGCTTCAAGTGCTAGCTTGGGACTTTCATTCTCATTCACTGGCTTCACCATGCCTCCAGAGGAAATTGCTGACTCCAAACCCTTCAGTGATGATGATATCCCTGAGGATATTGAAGCTGGACCTAGGACAAAGTTTCAAACGGAACCTACTCTACCAATATATCTAAAGTTCACGGATGTGACCTACAAGATAGTGATCAAAGGCATGACAACAACTGAGGAGAAGGATATCTTGAATGGGATCACTGGTTCTGTAAATCCAGGGGAAGTTTTGGCCTTGATGGGTCCCTCAGGAAGTGGAAAAACAACTCTTTTAAACCTTCTTGGAGGCAGGTTAAGCCATCCTATAAGTGGTGGTTCTATCACTTACAATGACCAACCATATTCCAAGTTCCTTAAGAGCAGGATAGGATTTGTGACACAAGATGATGTTCTGTTTCCTCACCTAACTGTGAAAGAGACATTGACATACGCAGCCAGGCTAAGACTACCAAAGACATACACAAGGGAGCAAAAGGAAAAACGAGCTTTAGATGTAATCTATGAGCTTGGCTTGGAGAGGTGCCAAGACACTATGATTGGTGGTTCCTTTGTCCGTGGAGTATCTGGTGGTGAGAGGAAGAGGGTTTGTATTGGCAATGAGATCATAATCAACCCTTCTGTTCTTTTTCTTGATGAACCAACATCTGGTTTGGATTCTACAACAGCCTTGAGGATTGTGCAGATGCTACAAGACATAGCGGAGGCTGGTAAAACAGTGGTGACAACAATTCACCAACCATCAAGCAGACTCTTTCACAAATTTGACAAGTTGATCCTTCTTGGAAAAGGGAGCTTGCTCTACTTTGGAAAAGCATCAGAAGCAATGACTTACTTCCAGTCTATAGGATGTTCACCACTTATTTCCATGAACCCAGCAGAGTTTTTGCTAGACCTTGCTAATGGAAACATAAATGATGTTTCCCTACCTTCAGAGTTGGAAGATAGAGTGCAGATGGGAAATGCAGAAGCAGAAACACAAAATGGGAAGCCATCACCAGCAGTTGTACATGAGTATCTGGTGGAGGCATACGAAACTCGAGTAGCAGAAGCAGAAAAGAAAAGACTAATGGTTCCTATACCCCTTGATGATGCACTGAAGACTAAAGTGTGTTCTCATAAGAGACAATGGGGAGCAAGTTGGGATGAGCAATATTCCATATTATTTTGGAGAGGAATCAAAGAGCGGAGGCATGACTATTTTAGCTGGTTGAGAATCACCCAAGTCTTATCCACTGCAGTCATCTTAGGATTACTCTGGTGGCAATCAGATACTAAGAACCCAAAAGATCTGCAAGATCAGGCAGGATTGCTATTCTTTATTGCTGTTTTCTGGGGATTTTTTCCTGTTTTCACTGCAATATTCACATTTCCTCAAGAGAGAGCCATGCTGAGTAAGGAGAGAGCAGCAGATATGTACAGACTAAGTGCATACTTCCTGGCTAGAACCACAAGTGACCTTCCACTAGACCTCATTTTACCAATGCTTTTTCTACTTGTTGTTTATTTCATGGCCGGTCTCAGACTCAATGTTGCACCATTTTTCCTCACCATTCTTACTGTCTTCCTCTGCATAGTGGCTGCTCAGGGACTTGGACTTGCTATTGGAGCCACACTAATGGACTTGAAAAGAGCAACTACTTTGGCTTCAGTAACTGTGATGACCTTCATGCTAGCTGGAGGATTTTTTGTGCAGAGAGTCCCCATATTTTTTTCTTGGATCCGGTACATGTCATTCAACTACCACACCTACAAACTCTTGCTCAAGGTGCAATATGAACACATCTCACCTGTCATAAATGGGATCAGAATTGATAGTGGTGCAACAGAAGTAGCTGCTCTAATAGCCATGGTTTTTGGTTACCGTTTCTTGGCATATCTTTCTCTAAGGCGAATGAAACTTCAATCTGGAGCTTAA 2232 0.4427 MEKANTSLVRTKSDQLVESMVAALKSPPSSDHSANGAVEGGGNLSRKSSRRLTGASPGRGGKNTHIRKSRSAQISQMKLELDDVSSGAALSRASSASLGLSFSFTGFTMPPEEIADSKPFSDDDIPEDIEAGPRTKFQTEPTLPIYLKFTDVTYKIVIKGMTTTEEKDILNGITGSVNPGEVLALMGPSGSGKTTLLNLLGGRLSHPISGGSITYNDQPYSKFLKSRIGFVTQDDVLFPHLTVKETLTYAARLRLPKTYTREQKEKRALDVIYELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSVLFLDEPTSGLDSTTALRIVQMLQDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASEAMTYFQSIGCSPLISMNPAEFLLDLANGNINDVSLPSELEDRVQMGNAEAETQNGKPSPAVVHEYLVEAYETRVAEAEKKRLMVPIPLDDALKTKVCSHKRQWGASWDEQYSILFWRGIKERRHDYFSWLRITQVLSTAVILGLLWWQSDTKNPKDLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLSKERAADMYRLSAYFLARTTSDLPLDLILPMLFLLVVYFMAGLRLNVAPFFLTILTVFLCIVAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVQRVPIFFSWIRYMSFNYHTYKLLLKVQYEHISPVINGIRIDSGATEVAALIAMVFGYRFLAYLSLRRMKLQSGA 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02965 743 ProSitePatterns ABC transporters family signature. 293 307 IPR017871 GO:0005524|GO:0016887
Pumo3g02965 743 Pfam ABC-2 type transporter 488 697 IPR013525 GO:0016020|GO:0140359
Pumo3g02965 743 MobiDBLite consensus disorder prediction 19 72 - -
Pumo3g02965 743 Gene3D - 146 387 IPR027417 -
Pumo3g02965 743 SMART AAA_5 179 370 IPR003593 GO:0016887
Pumo3g02965 743 FunFam ABC transporter G family member 22 157 387 - -
Pumo3g02965 743 Pfam ABC transporter 170 321 IPR003439 GO:0005524
Pumo3g02965 743 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 147 393 IPR003439 GO:0005524
Pumo3g02965 743 CDD ABCG_EPDR 144 375 - -
Pumo3g02965 743 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 165 385 IPR027417 -
Pumo3g02965 743 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 113 731 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02965 Pumo-Chr3 52953587 52965218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02965 169 407 Calmodulin-binding Proteins AT2G36910 29.796 3.28e-16 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02965 K05681 - gmx:100798801 1400.96