Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02951 ATGGCTTTCCCTCCCCACGTAGTAGAGGACTGCATGGGCCTCCTCAAACTCTTGAGCGACGGCACCGTTTTGCGTTCCAATATTCACTTCCAAGAACAACCTTCACCCACCCAACACGACAACCTCGTAGTATTCAAAGACTACCTCTTCCACAAAAAATTCAACCTCCACCTCCGTCTCTACAAACCCAAATTTGACGACAACAACAATAATGACAACAACAACGAAGAGAAGATGCCTGTGGTGATGTTCCTCCGCGGCGGCGGCTTCTGCTTCGGCTCGCGCGCGTGGCCGCACATTCACGCCTGCTGCGTGCGCCTCGCGGCGGGTCTCCGCGCCGCCGTGGTGGCGCCGGACTACCGCCTCGCGCCGGAGCACCGCCTCCCCGCGGCGGTGGACGACGGCGTGGAGGCCTTGTGGTGGCTGCAGCGGCAGGGCCGCGGCCACGGCGGGGACAGGTGGGTGACTCGGGGCGTTGACTTTGACCGAGTGTTTGTCGTTGGCGACTCCTCTGGCGGGAACATCGCGCACCACTTGGCGGTTCAGCTGGGACCCGGTTCGAGGGAGATGGACCCGGTTCGCGTACGAGGTTACGTTCTGCTGGGTCCGTTTTTCGGTGGGGTGGTTCGGACCATGTCGGAGGTGGGCCCACCGGAACAAATGCTGACCCTAGAGATGCTCGACAGATTTTGGAGGCTGTCAATGCCTATTGGAGAGACAAGAGATCACCCATTGGCAAACCCATTTGGACCTAAGAGTCCAAACCTTGGACATGTGAAGCTTGACCCTATCTTAGTGATAGTTGGTGGCAAAGAATTGCTGAAGGACAGAGCAGTGGACTATGCAACAAGGTTAAAAGAACTAGGGAAGAACATTGATTACGTTGAGTTTAAGGGCAAGGAACATGGCTTTCTCACTCATGATTCGTACTCGGAGGCTGCGGAAGAGGTCGTGCAACTCATTAAACGGTTCATGCTTGAAAATTCTAATTAA 993 0.5579 MAFPPHVVEDCMGLLKLLSDGTVLRSNIHFQEQPSPTQHDNLVVFKDYLFHKKFNLHLRLYKPKFDDNNNNDNNNEEKMPVVMFLRGGGFCFGSRAWPHIHACCVRLAAGLRAAVVAPDYRLAPEHRLPAAVDDGVEALWWLQRQGRGHGGDRWVTRGVDFDRVFVVGDSSGGNIAHHLAVQLGPGSREMDPVRVRGYVLLGPFFGGVVRTMSEVGPPEQMLTLEMLDRFWRLSMPIGETRDHPLANPFGPKSPNLGHVKLDPILVIVGGKELLKDRAVDYATRLKELGKNIDYVEFKGKEHGFLTHDSYSEAAEEVVQLIKRFMLENSN 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02951 330 Gene3D alpha/beta hydrolase 15 329 IPR029058 -
Pumo3g02951 330 Pfam alpha/beta hydrolase fold 82 305 IPR013094 GO:0016787
Pumo3g02951 330 SUPERFAMILY alpha/beta-Hydrolases 5 325 IPR029058 -
Pumo3g02951 330 PANTHER ARYLACETAMIDE DEACETYLASE 16 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02951 Pumo-Chr3 52711695 52717741 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02951 7 324 Carbohydrate Esterase AT5G16080 32.508 2.88e-52 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02951 - - gmx:100805368 574.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02951 3 52711695 52717741 Pumo3g02951 3 52711695 52717741 ECH
Pumo5g03301 5 82200030 82203823 Pumo3g02951 3 52711695 52717741 PCT