Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02932 ATGAGGGGAAGAAGCTACAGCTACAGCCCATCTCCTCCAAGGCGTTACAGCCGAAGAAGGCGCAGTCCTAGCCCTAGGGGCCGATACAGAGGACGTGATAGGGATTTGCCAACAAGTCTTCTGGTTCGGAACCTCCACAGAGATTGCAGGCCAGAAGATCTGCATGGTCCATTTGGCCAATTTGGTCCTCTTAAGGATGTTTATCTGCCTCGAGATTATTATACAGGGGAGCCAAGAGGTTTTGGGTTTGTCCAGTATGTGGACCCAGCTGATGCTGCAGATGCAAAATATCACATGGACGGTCAAATTCTTCTTGGTCGCGAGTTAACTGTAGTGTTTGCTGAAGAAAACAGAAAGAAACCTGCTGAAATGAGAGCAAGAGAATGTAGGAGGGATCGATCATATGATTATAGGCGATCTCCACGAGCCTATTCACGTAGTCCAGAGTATTCACCTTCTCCAAGACGAAGGCGACATTACAGGTCAATCTCACCAAGGGACAGAAAGTATAGGGATCGATCATACTCTAGATCACCTTATGCATCAAGAAGCCGCAGCAGAAGCAGAAGCAGGAGTTACAGTAGGAGCTTGAGCCGAAGTCCGGGCTACTCTAGGTGA 618 0.4838 MRGRSYSYSPSPPRRYSRRRRSPSPRGRYRGRDRDLPTSLLVRNLHRDCRPEDLHGPFGQFGPLKDVYLPRDYYTGEPRGFGFVQYVDPADAADAKYHMDGQILLGRELTVVFAEENRKKPAEMRARECRRDRSYDYRRSPRAYSRSPEYSPSPRRRRHYRSISPRDRKYRDRSYSRSPYASRSRSRSRSRSYSRSLSRSPGYSR 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02932 205 PANTHER TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED 37 201 - -
Pumo3g02932 205 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 38 116 IPR000504 GO:0003723
Pumo3g02932 205 MobiDBLite consensus disorder prediction 1 36 - -
Pumo3g02932 205 Gene3D - 2 127 IPR012677 -
Pumo3g02932 205 MobiDBLite consensus disorder prediction 120 205 - -
Pumo3g02932 205 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 40 109 IPR000504 GO:0003723
Pumo3g02932 205 SUPERFAMILY RNA-binding domain, RBD 38 142 IPR035979 GO:0003676
Pumo3g02932 205 MobiDBLite consensus disorder prediction 120 143 - -
Pumo3g02932 205 SMART rrm1_1 39 112 IPR000504 GO:0003723
Pumo3g02932 205 MobiDBLite consensus disorder prediction 179 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02932 Pumo-Chr3 52201919 52204264 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02932 38 162 Eukaryotic Initiation Factors Gene Family AT4G34110 26.984 6.65e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02932 K12900 - gmx:100816913 207.994