Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02928 ATGGGCGTCAATTCGCTGCCATCGGCGGAATCAAACCTCGATCTCGACGAGCAGATCTCGCAGCTCATGCAATGCAAGCCGCTCTCCGAACACCAGGTTAGAGTTTTATGTGAGAAGGCTAAGGAGATTTTGATGGATGAAAGTAATGTCCAGCCTGTGAAAAGCCCCGTGACAATTTGTGGTGATATTCATGGGCAGTTTCATGATCTTGCTGAACTATTTCGAATTGGAGGGAAGTGTCCAGATACTAATTACTTGTTTATGGGTGATTATGTGGACCGGGGTTATTATTCAGTTGAAACTGTGACACTTCTTGTGGCACTGAAAGTACGATATCATCAGCGAATTACTATTCTTAGAGGAAACCATGAAAGCCGTCAGATCACTCAAGTATATGGATTTTACGATGAATGCCTCAGAAAGTATGGTAATGCTAATGTTTGGAAGATCTTTACAGACCTTTTTGATTTCTTTCCATTGACTGCATTGGTCGAGTCAGAAATATTTTGTTTGCATGGTGGGCTTTCACCTTCAATTGAGACTCTTGATAACATAAGGAACTTTGATCGTGTTCAAGAGGTTCCTCATGAAGGGCCCATGTGTGATCTGTTGTGGTCTGACCCAGATGATAGGTGCGGGTGGGGAATTTCTCCTCGTGGTGCTGGATATACATTTGGCCAGGATATATCCGAACAATTTAATCACACAAACAAGCTTAAGTTAATTGCCAGAGCTCATCAGCTGGTTATGGATGGATTTAACTGGGCTCATGAACAAAAGGTGGTTACCATTTTTAGTGCACCTAACTACTGTTATCGATGTGGGAACATGGCTTCCATTTTGGAGGTTGACGATTCCAAGGGCCACACATTTATCCAGTTTGAACCTGCTCCCAGGAGAGGAGAACCCGATGTCACCCGCAGAACTCCTGATTACTTCCTATGA 945 0.4349 MGVNSLPSAESNLDLDEQISQLMQCKPLSEHQVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYHQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDFFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNKLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDSKGHTFIQFEPAPRRGEPDVTRRTPDYFL 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02928 314 SUPERFAMILY Metallo-dependent phosphatases 10 299 IPR029052 -
Pumo3g02928 314 CDD MPP_PP2A_PP4_PP6 14 298 - -
Pumo3g02928 314 Gene3D - 8 314 IPR029052 -
Pumo3g02928 314 FunFam Serine/threonine-protein phosphatase 8 314 - -
Pumo3g02928 314 SMART pp2a_7 28 298 IPR006186 GO:0016787
Pumo3g02928 314 PRINTS Serine/threonine phosphatase family signature 153 179 IPR006186 GO:0016787
Pumo3g02928 314 PRINTS Serine/threonine phosphatase family signature 56 83 IPR006186 GO:0016787
Pumo3g02928 314 PRINTS Serine/threonine phosphatase family signature 182 209 IPR006186 GO:0016787
Pumo3g02928 314 PRINTS Serine/threonine phosphatase family signature 238 258 IPR006186 GO:0016787
Pumo3g02928 314 PRINTS Serine/threonine phosphatase family signature 260 276 IPR006186 GO:0016787
Pumo3g02928 314 PRINTS Serine/threonine phosphatase family signature 118 142 IPR006186 GO:0016787
Pumo3g02928 314 PRINTS Serine/threonine phosphatase family signature 85 112 IPR006186 GO:0016787
Pumo3g02928 314 ProSitePatterns Serine/threonine specific protein phosphatases signature. 119 124 IPR006186 GO:0016787
Pumo3g02928 314 Pfam Calcineurin-like phosphoesterase 56 247 IPR004843 GO:0016787
Pumo3g02928 314 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 14 314 IPR047129 GO:0004722
Pumo3g02928 314 MobiDBLite consensus disorder prediction 295 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02928 Pumo-Chr3 52125569 52131092 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02928 20 244 Calmodulin-binding Proteins AT5G63870 34.082 5.47e-32 119