Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02919 ATGGACAAGACAACAACATCAACAACAACCTCCGAGAGAGAAACTCACGACTTCATGAACGTCGACTCGTTCTCCCAACTCCCCTTCATCCGCCCGGCTCCTCTCGTGAAAGAGAAGTCAGGCATTCGCCTCTTCGGCATCGAATTCGCCGGCGGAAACAACAACAGCAACACTACCACTTCTGTTGTTGTCTCCGCCGACGACTCCGAGTCGGCCGAGACCACAACAACAACAACCAACACCAACAACAACAACAACCACCTCAACTCATTCGACCTCGACCCCAACAAGGACGAGGTCATCGCCACCGCCACCACCACCGCCACCGACACCAACGGCGATAGCAGCCGCCGCTTCGAGTGCCACTACTGCTGCCGCAACTTCCCCACCTCCCAAGCCCTCGGCGGCCACCAGAACGCCCACAAACGCGAACGCCAGCACGCCAAACGCGCCCACCTCCAGTCCACGATGGTGCACGGCAGCACCTTCTCCGACGCGCACCACGTGTACAATCTCATGAACTACCGCTTCGGCTCCACTCCAACACCACCACCAACAATGACTTATCCAACTTGGAACACAAACAACACCACTTCGCCGCGCTTCTACGGAACAACAACAACGACGACGTCGTTTCCTCACCACCACCACCAACAACAACCTATTAACGGAAGCCCTCTAGCGTTTTGGCGAATCCCGAGCGGAACCACCACCAATAACAACCCTAGTTTCAGCCACGAACGTTCCTCGTTGCCGCCTCTGTTCGCGACCGAGGACATAGCAAACGTGAGAGCCTCGCAGGTTGTTGTCGGAGCCTCGGGGCCGACGCAAAACCGCTACGTGTATGACTCCAAACGCGACCATGTGAGTTTGGATCTTCATCTGTAA 888 0.5642 MDKTTTSTTTSERETHDFMNVDSFSQLPFIRPAPLVKEKSGIRLFGIEFAGGNNNSNTTTSVVVSADDSESAETTTTTTNTNNNNNHLNSFDLDPNKDEVIATATTTATDTNGDSSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSTMVHGSTFSDAHHVYNLMNYRFGSTPTPPPTMTYPTWNTNNTTSPRFYGTTTTTTSFPHHHHQQQPINGSPLAFWRIPSGTTTNNNPSFSHERSSLPPLFATEDIANVRASQVVVGASGPTQNRYVYDSKRDHVSLDLHL 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02919 295 ProSiteProfiles Zinc finger C2H2 type domain profile. 119 146 IPR013087 -
Pumo3g02919 295 MobiDBLite consensus disorder prediction 63 86 - -
Pumo3g02919 295 MobiDBLite consensus disorder prediction 210 250 - -
Pumo3g02919 295 ProSitePatterns Zinc finger C2H2 type domain signature. 121 141 IPR013087 -
Pumo3g02919 295 PANTHER ZINC FINGER PROTEIN GIS 1 295 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
Pumo3g02919 295 SUPERFAMILY beta-beta-alpha zinc fingers 116 147 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02919 Pumo-Chr3 51931998 51933251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02919 9 295 C2H2 Transcription Factor Family AT2G41940 36.700 7.31e-40 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02919 - - gmx:100806594 421.394