Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02907 ATGCTTTCTACTACTACTAATTATTCCCTTCTTGCAACCATTTTCTTGAAGGCTCAATTGAGTGCAACCTTCTATTCTAGCACATGCTCCAATGTGTCATCTATAGTGAGGAATGCTGTTCAGCAGGCTCTGCAATCTGATTCACGTATTGGTGCAAGCCTCACTCGCCTCCACTTTCATGATTGCTTTGTCAATGGGTGTGATGGGTCCTTATTGTTAGACCAAGGTGGTAACATTACACAAAGCGAGAAAAATGCAGCTCCCAACGCTAATTCCGTTCGAGGCTTTGATGTTGTTGATAACATCAAGAGCTCCCTCGAAAGTTCATGCCCTGGAGTTGTATCTTGTGCTGATATCCTTGCTCTTGCAGCAGAATCTTCTGTTTCCTTGTCAGGAGGTCCTTCATGGAATGTACTACTTGGAAGAAGGGATGGTCTAACTGCGAACCAAGCTGGTGCCAACAGCTCCATTCCCTCTCCATTTAGAGAGCCTAGCCAATGTGCACACACTTTTGGTCGTGCCCAATGCCGATTTTTCTCCCAAAGGCTGTTCAACTTCAGTGGTACAGGAAGCCCTGACCCAACCCTGAACTCAACCTATTTGGCCACTCTGCAACAAAATTGTCCCCAAAATGGAAATGGGTCTACATTGAACAACCTTGATCCTTCAACCCCTGACACTTTTGACAACAACTATTTCACCAATCTTCTCATCAACCAGGGTCTTCTCCAAACAGATCAAGAACTCTTCTCCACTAATGGCTCTTCCACAATCTCTATTGTTAACAACTTTGCCAACAATCAAACGGCCTTCTTTGAAGCATTTGCTCAATCAATGATCAACATGGGTAACATCAGCCCTTTGACTGGATCACAGGGAGAAATTAGAACCGATTGTAAGAAAGGGTGTGATGGGTCCATATTGTTAGACCAAGGTGGTAACATCACACAAAGCGAGAAAAATGCTGCTCCCAACGCCAATTCCGTTCGAGGCTTTGATGTTGTTGATAACATCAAGAGCTCCCTCGAAAGTTCATGCCCTGGAGTTGTATCTTGTGCTGATATTCTTGCACTTGCAGCAGAATCTTCTGTGTCCTTGTCAGGAGGTCCTTCATGGAATGTACTACTCGGAAGAAGGGACGGTCTAACTGCAAACCAAGCTGGTGCCAATAGCTCCCTCCCCTCTCCATTTGAGAGCCTAGCCAACGTCTCATCCAAATTCTCTGCTGTTGGCTTAGACACAACCGATCTCGTTGCATTATCTGGTGCACACACTTTTGGCCGTGCCCAATGCCAATTCTTCTCCCAAAGGTTGTTCAACTTCAGTGGCACAGGAAGCCCTGACCCAACCCTGAACTCAACCTATTTGGCCACTCTACAACAAAATTGTCCCCAAAATGGAAATGGGTCTACATTGAACAACCTTGATCCTTCAACCCCTGACACTTTTGACAACAACTATTTCACCAATCTTCTCATCAACCAGGGTCTTCTCCAAACGGACCAGGAGCTCTTCTCCACTAATGGCTCTTCCACAATCTCCATTGTTAACAACTTTGCCAACAACCAAACTGCCTTCTTTGAAGCCTTTGCTCAATCAATGATCAACATGGGTAACATTAGCCCTTTGACTGGAACTCAAGGAGAAATCAGAAATGATTGTAAGAAAGTCAATGGAAGTTGA 1683 0.4492 MLSTTTNYSLLATIFLKAQLSATFYSSTCSNVSSIVRNAVQQALQSDSRIGASLTRLHFHDCFVNGCDGSLLLDQGGNITQSEKNAAPNANSVRGFDVVDNIKSSLESSCPGVVSCADILALAAESSVSLSGGPSWNVLLGRRDGLTANQAGANSSIPSPFREPSQCAHTFGRAQCRFFSQRLFNFSGTGSPDPTLNSTYLATLQQNCPQNGNGSTLNNLDPSTPDTFDNNYFTNLLINQGLLQTDQELFSTNGSSTISIVNNFANNQTAFFEAFAQSMINMGNISPLTGSQGEIRTDCKKGCDGSILLDQGGNITQSEKNAAPNANSVRGFDVVDNIKSSLESSCPGVVSCADILALAAESSVSLSGGPSWNVLLGRRDGLTANQAGANSSLPSPFESLANVSSKFSAVGLDTTDLVALSGAHTFGRAQCQFFSQRLFNFSGTGSPDPTLNSTYLATLQQNCPQNGNGSTLNNLDPSTPDTFDNNYFTNLLINQGLLQTDQELFSTNGSSTISIVNNFANNQTAFFEAFAQSMINMGNISPLTGTQGEIRNDCKKVNGS 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02907 560 FunFam Peroxidase 23 177 - -
Pumo3g02907 560 SUPERFAMILY Heme-dependent peroxidases 301 558 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pumo3g02907 560 Gene3D - 23 300 - -
Pumo3g02907 560 Gene3D Peroxidase, domain 2 158 282 - -
Pumo3g02907 560 ProSiteProfiles Plant heme peroxidase family profile. 19 558 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo3g02907 560 PANTHER PEROXIDASE 72-RELATED 299 557 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g02907 560 Gene3D - 301 558 - -
Pumo3g02907 560 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g02907 560 PRINTS Plant peroxidase signature 53 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g02907 560 PRINTS Plant peroxidase signature 219 234 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g02907 560 PRINTS Plant peroxidase signature 29 48 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g02907 560 PRINTS Plant peroxidase signature 235 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g02907 560 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g02907 560 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g02907 560 PRINTS Plant peroxidase signature 277 290 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g02907 560 CDD secretory_peroxidase 19 301 IPR033905 GO:0004601|GO:0042744
Pumo3g02907 560 SUPERFAMILY Heme-dependent peroxidases 19 300 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pumo3g02907 560 Pfam Peroxidase 167 267 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo3g02907 560 Pfam Peroxidase 36 165 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo3g02907 560 Pfam Peroxidase 301 522 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo3g02907 560 ProSitePatterns Peroxidases proximal heme-ligand signature. 416 426 IPR019793 -
Pumo3g02907 560 FunFam Peroxidase 166 282 - -
Pumo3g02907 560 Gene3D Peroxidase, domain 2 394 537 - -
Pumo3g02907 560 CDD secretory_peroxidase 298 557 IPR033905 GO:0004601|GO:0042744
Pumo3g02907 560 FunFam Peroxidase 394 537 - -
Pumo3g02907 560 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo3g02907 560 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo3g02907 560 PRINTS Haem peroxidase superfamily signature 221 236 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo3g02907 560 PRINTS Haem peroxidase superfamily signature 51 65 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02907 Pumo-Chr3 51282569 51316954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02907 298 560 Peroxidase AT5G06720 76.515 7.91e-139 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02907 K00430 - gmx:100782549 530.406