Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02906 ATGAGGATCCGTAAGAGACAAGTGCCTTTCCCTCTCTTGCCGGTGACTCACTCAGATCCCAACCTGATCAACCGGTCACCGGTGATGGTGCAACTCAACGATGCCACCAAAGCCTCTTGCACTCATCATGGTTCAACCACTGCACCCTCACCACTCTTGGATCTTCCTCAGCCGTCTGATCAGCCTCTCCCACCGATCGGGAAACCCACCAACGGCTCTGATGAGTCCTCCGGAGAAGGTGGGACACAGTACATGAGGCACCAGCACAAGAAGCAAGAAGAGTCTTTGGTTAGTGGAAATATTATTTCACATGAATTCGTTTTAATTTTTTGGTCTTCTTTTTTGGGGGGTGAGCTTGTGAAATTAGTGCACTTTTGTCCAACCTTTGACAACGGGTGGAAGATGGGAGAAGGAAAGAAGAGGGAGAGGGACAGAAGGGTAATGATACCAGGAAAGGAAGCATCTCGTGTTCCGAAACGCCAGCTGAAACATTTTCATCTCCAAGCCCTCCTAAACAAGATGGGAGATGGTGCGAGGGAGATAAAGCTTTTCCATTCAAGAAAAGAAGAGGAGCCTTCGAGAATGCAACTGGAGGATAACAACAACAACAACGATAACGACGACAAAGATAAGAAGAATAATTCCAGGCTGAAGATGAAGAGGATGAAGACGAAGATGAACAAGAAGTGTTCAAGGCAAGACGATAGCAATGAAGAAGAAGAGGTAGAGAACGAGGAAGAGGCGACAAGAGAGACGAAACCTGAACAAGCAAACGTTGGTAATAAGAAGAGGGTAAGGGGTGGTGCACTAATGGAAGGTTCAAGGTGCAGTCGTGTAAATGGGAGAGGATGGAGGTGTTGCCAACAAACCTTGGTGGGTTACTCTCTTTGCGAGCATCACTTAGGGAAGGGAAGGTTGAGAAGCATGACAAGTGTGAGAAACAAGTATATTGGTACAAGTAGTACAAGTACAACAACAACAAGTGGTGCACCAAAGAATAACAACATGCCACAATCCGAGGATTCATCAAAAAACCAAACAACAACAAAGTCTAGTAGTGAAGACCCTTTGGGAAATGATGCTGAAAGCAATGATGAAGAGAAGAAGCCAGTGATGGTCACAAAGAGGAGGGTGAAGCTTGGAATGGTGAAAGCTCGATCCATAAGCAGCTTGCTTGGACAAACCAACACTGAAATTGTTGCCATAGCTGAGGATAATAATGATAGCAAGTAA 1233 0.4566 MRIRKRQVPFPLLPVTHSDPNLINRSPVMVQLNDATKASCTHHGSTTAPSPLLDLPQPSDQPLPPIGKPTNGSDESSGEGGTQYMRHQHKKQEESLVSGNIISHEFVLIFWSSFLGGELVKLVHFCPTFDNGWKMGEGKKRERDRRVMIPGKEASRVPKRQLKHFHLQALLNKMGDGAREIKLFHSRKEEEPSRMQLEDNNNNNDNDDKDKKNNSRLKMKRMKTKMNKKCSRQDDSNEEEEVENEEEATRETKPEQANVGNKKRVRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRNKYIGTSSTSTTTTSGAPKNNNMPQSEDSSKNQTTTKSSSEDPLGNDAESNDEEKKPVMVTKRRVKLGMVKARSISSLLGQTNTEIVAIAEDNNDSK 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02906 410 MobiDBLite consensus disorder prediction 39 54 - -
Pumo3g02906 410 Pfam WRC 272 312 IPR014977 -
Pumo3g02906 410 ProSiteProfiles WRC domain profile. 270 314 IPR014977 -
Pumo3g02906 410 MobiDBLite consensus disorder prediction 39 92 - -
Pumo3g02906 410 MobiDBLite consensus disorder prediction 186 266 - -
Pumo3g02906 410 MobiDBLite consensus disorder prediction 318 358 - -
Pumo3g02906 410 MobiDBLite consensus disorder prediction 318 376 - -
Pumo3g02906 410 MobiDBLite consensus disorder prediction 186 215 - -
Pumo3g02906 410 PANTHER EXPRESSED PROTEIN-RELATED 189 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02906 Pumo-Chr3 51243550 51245952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02906 252 374 GRF Transcription Factor Family AT5G53660 29.688 2.98e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02906 - - gmx:102665471 370.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02906 3 51243550 51245952 Pumo3g02906 3 51243550 51245952 ECH
Pumo5g02673 5 72880996 72883754 Pumo3g02906 3 51243550 51245952 PCT