Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02902 ATGTTTTCGTGGCTGGCAAGGATAGTGTCGGCGTGCTTGAGACCGGTGCGGCGATATGCGCGTATGAGCAAGGATGACATCGATGACGTGTCCACCGTCGGCGACGCGCTCGTGTGGGGGAAGGACCTCGAGAAGCACTCGTGCGGCGAGTTCTCCTACGCCGTCGTTCAGGCCAACGAGGTCATCGAGGATCACAGCCAGGTCGAGACCGGCTCCGACGCCGTCTTCGTCGGAGTCTACGACGGTCACGGCGGCGCCGAAGCCTCCCGCTTCATCAACGACCACCTCTTCCTCAATCTCATGAAGGTTGCTCAAGAAAATGGTTCTATCTCTGAAGATATTATCAGAAATGCCGTTTCTGCTACTGAGGACGGGTTTCTGACACTTGTTCGAAGGAGTTATGGAATAAAGCCATTGATAGCAGCAATGGGTTCCTGTTGTCTTGTTGGTGTTGTCTGGAAAGGGACACTATATATCGCGAATCTCGGAGATTCTCGCGCTGTAATTGGTTCTGTAGGTAGATCTAACAAGATCATTGCTGAACAGTTGACCAAAGAGCACAATGCTAGCAAAGAGGAGGTTAGACGAGAACTCAAGTCTTTGCATCCGGAAGATTCACAAATCGTAGTTATGAAGCAAGGAACCTGGCGCATTAAAGGCATCATCCAGGTATCCAGATCTATAGGAGATGCATATTTGAAGCGGCCAGAGTTCTCGTTTGATCCGTCATTCCCACGGTTCCACTTGCCTGAACCTATCCGCCGGCCTGTGCTAACAGCAGAACCATCTATATGTTCAAGAGTTTTAAAACCTAATGATAAGTTCATTATCTTTGCATCTGATGGACTTTGGGAACACTTGACAAACCAGGAAGCTGCTGAGATTGTTCATAACAATCCACGAACCGGGATTGCAAGAAGACTTCTTAAGGCGGCTTTAAACGAGGCAGCTAGGAAAAGGGAAATGAGATATAAAGACCTTCAGAAGATTGGAAAGGGGATTAGGCGTTTCTTCCACGACGATATCACTGTGGTTGTCGTCTTCATCGACCACGAGTTGCGCGGCAAGAATGTTACAGTTCCTGAGTTGTCCATCAAAGGGTTTATTGACACAGTTGGACCATCAAATTTTAGAAATTTGCGGGGATTGGAATGA 1155 0.484 MFSWLARIVSACLRPVRRYARMSKDDIDDVSTVGDALVWGKDLEKHSCGEFSYAVVQANEVIEDHSQVETGSDAVFVGVYDGHGGAEASRFINDHLFLNLMKVAQENGSISEDIIRNAVSATEDGFLTLVRRSYGIKPLIAAMGSCCLVGVVWKGTLYIANLGDSRAVIGSVGRSNKIIAEQLTKEHNASKEEVRRELKSLHPEDSQIVVMKQGTWRIKGIIQVSRSIGDAYLKRPEFSFDPSFPRFHLPEPIRRPVLTAEPSICSRVLKPNDKFIIFASDGLWEHLTNQEAAEIVHNNPRTGIARRLLKAALNEAARKREMRYKDLQKIGKGIRRFFHDDITVVVVFIDHELRGKNVTVPELSIKGFIDTVGPSNFRNLRGLE 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02902 384 ProSiteProfiles PPM-type phosphatase domain profile. 47 349 IPR001932 -
Pumo3g02902 384 SUPERFAMILY PP2C-like 55 350 IPR036457 -
Pumo3g02902 384 Coils Coil 180 200 - -
Pumo3g02902 384 PANTHER PROTEIN PHOSPHATASE 41 350 IPR015655 GO:0004722|GO:0006470
Pumo3g02902 384 Pfam Protein phosphatase 2C 68 318 IPR001932 -
Pumo3g02902 384 SMART PP2C_4 44 347 IPR001932 -
Pumo3g02902 384 Gene3D - 36 357 IPR036457 -
Pumo3g02902 384 CDD PP2Cc 51 349 IPR001932 -
Pumo3g02902 384 ProSitePatterns PPM-type phosphatase domain signature. 76 84 IPR000222 GO:0043169
Pumo3g02902 384 FunFam Probable protein phosphatase 2C 42 41 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02902 Pumo-Chr3 50876276 50881830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02902 1 377 PP2C-type Phosphatase Gene Family AT5G06750 69.330 0.0 542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02902 K01102 - gmx:100778238 750.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02902 3 50876276 50881830 Pumo3g02902 3 50876276 50881830 ECH
Pumo3g02902 3 50876276 50881830 Pumo6g01118 6 14755603 14764510 ECH