Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02883 ATGTATCATTTTTCGCAGGTGTCAGAGGGAGCACATAGCACTGATAGCAGTGTAGCCAACGTTGGAGGCTCAGAGAAAGACAGCATCAACTTCCAACAACATGTGTTCGATGTTCCCATTTCGTGTTTGAAGTTCGATTCACAAAATTTGTTGTGTCAGTCTTGTGGGGATCACAACTCAGCTCCACTGTTCGGAAGTGGTGTTGTTGATCCTTTCTTGTCCAGCGATGAAGACAGGTTTTGTAACACATATAGTGAACTTTATGAGCATTTCAGATTGGAGGGTGGTGATGGTGATTCTGCCCCAGTTAATCAGGTTGAGGTTGTTTGTGCCACTTCTGGAAAGTCTGCTTCTAGCATGGTACCAACTAAGAAAAATAGAATAAAATGGACCAAAGATTTGCATGAGCAATTCGTTGTGGCTGTCAATAGCCTTGGTGGTCCTCAAAAAGCAAGGCCCAAGGCAGTGCTACAGATGATGAATTCAAAGTCGCTAACCATTTTTCAAGTTAAAAGCCACTTGCAGAAATATCGGACCACAATGTGCGTAAAGAACACTTCCAAAGAGGGGTACGAAGAAAGCCATGGCAGAGACATGATAACTGAACTTCAACAGAAAATATATATGCAAATTGAGGAATCACGACAATTGCAAGTTGAGATTGGGAGGGGTATTCAAGAACAATTGGAGGTTCAACGAAATTTGCAAATGCTAGTCGAAGAACAAAAGAAACAGGTCAATAGTGTTTGTGGCCCAAAAAAGCAAACAAAGCAAATTGGAGGATCCAAATCTTGGGAGAATGACGGCAAAATATTTCTGAAAAATAAATAG 831 0.4128 MYHFSQVSEGAHSTDSSVANVGGSEKDSINFQQHVFDVPISCLKFDSQNLLCQSCGDHNSAPLFGSGVVDPFLSSDEDRFCNTYSELYEHFRLEGGDGDSAPVNQVEVVCATSGKSASSMVPTKKNRIKWTKDLHEQFVVAVNSLGGPQKARPKAVLQMMNSKSLTIFQVKSHLQKYRTTMCVKNTSKEGYEESHGRDMITELQQKIYMQIEESRQLQVEIGRGIQEQLEVQRNLQMLVEEQKKQVNSVCGPKKQTKQIGGSKSWENDGKIFLKNK 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02883 276 MobiDBLite consensus disorder prediction 1 21 - -
Pumo3g02883 276 Pfam Myb-like DNA-binding domain 129 178 IPR001005 -
Pumo3g02883 276 NCBIfam myb-like DNA-binding domain, SHAQKYF class 125 179 IPR006447 GO:0003677
Pumo3g02883 276 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 118 259 IPR044848 GO:0003700
Pumo3g02883 276 Gene3D - 124 181 - -
Pumo3g02883 276 FunFam Two-component response regulator 121 183 - -
Pumo3g02883 276 SUPERFAMILY Homeodomain-like 123 179 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02883 Pumo-Chr3 50365656 50367754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02883 113 244 G2-like Transcription Factor Family AT4G28610 47.761 4.26e-30 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pumo3g02883 Myb_DNA-binding 8.9e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02883 - - gmx:100776650 399.053