Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02876 ATGGAGGAATCACCGGCGAACAGGGAGAGCAAAAACGAAGAGCAAGAAGATGACTACATGGGTGACCTTTCTCAGTTTCTTCCTTCCGATGTTTTCGACCCTCCCAAGTTGTCTTCTTCATCCAAAAAGTTTACAGGTACCATACAAAGTGATGATAACTCCCTTTATGCCATGCAGATTTCCAGCAAGAAAGATCCTTCGGTCAACTCTTCAAAGAACCGGTTGAAAACTCTTAGCTGGCAAGAGCGGCGAAAACTTGAAAGAGAAAGGAAGCAACAAGAAGAGGATGAGCAAACATTATCAAAAGTGGAAGCTCCAATACCACAATCCAACATTGGGTTTAAGCTTCTCAAACAGATGGGTTACACTCCAGGTTCTGCCCTAGGCAAGCAGGGTTCGGGCAGGGCCGAACCGGTGGGGATTGAAATTCGACGGTCACGAGCTGGTGTAGGCTTAGAAGATCCCCACAAGGAGAAGAGGAAAAAGGAGGAAATCATGATGCACAGGAAAAGGAGGAAAGAGGAGGATCTAATGAAAGAATTTGGGTCTAGGCAGAAGTCACAGTGGCAGAGTAGGAGAGTGATAATTAATTACAATAAGGCAAAGGCTGCCCTTGACCAATTAGAGAATAGGGAAATTGTGGAGCCACAAAAGAATGACGATGATGCAGAGGGTGAAGAAGAAGAAGAGGAAGAAATAACAGAAGAGGACTTGCTCGATGTTTTGATGAAACTGAGGGATGAATTTAATTATTGCCTCTTTTGTGGATGCCAATATGAATCGAGTGATGCCCTTTTGGCCAACTGCCCTGGAACCAATGAAGATGACCACTAA 834 0.446 MEESPANRESKNEEQEDDYMGDLSQFLPSDVFDPPKLSSSSKKFTGTIQSDDNSLYAMQISSKKDPSVNSSKNRLKTLSWQERRKLERERKQQEEDEQTLSKVEAPIPQSNIGFKLLKQMGYTPGSALGKQGSGRAEPVGIEIRRSRAGVGLEDPHKEKRKKEEIMMHRKRRKEEDLMKEFGSRQKSQWQSRRVIINYNKAKAALDQLENREIVEPQKNDDDAEGEEEEEEEITEEDLLDVLMKLRDEFNYCLFCGCQYESSDALLANCPGTNEDDH 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02876 277 ProSiteProfiles G-patch domain profile. 109 155 IPR000467 GO:0003676
Pumo3g02876 277 MobiDBLite consensus disorder prediction 1 106 - -
Pumo3g02876 277 MobiDBLite consensus disorder prediction 147 171 - -
Pumo3g02876 277 MobiDBLite consensus disorder prediction 219 236 - -
Pumo3g02876 277 SMART G-patch_5 107 153 IPR000467 GO:0003676
Pumo3g02876 277 PANTHER UNCHARACTERIZED 13 277 IPR039249 -
Pumo3g02876 277 Coils Coil 191 211 - -
Pumo3g02876 277 Coils Coil 83 103 - -
Pumo3g02876 277 MobiDBLite consensus disorder prediction 209 236 - -
Pumo3g02876 277 Pfam G-patch domain 109 152 IPR000467 GO:0003676
Pumo3g02876 277 MobiDBLite consensus disorder prediction 1 18 - -
Pumo3g02876 277 MobiDBLite consensus disorder prediction 34 76 - -
Pumo3g02876 277 MobiDBLite consensus disorder prediction 144 171 - -
Pumo3g02876 277 MobiDBLite consensus disorder prediction 77 101 - -
Pumo3g02876 277 Pfam Domain of unknown function (DUF4187) 226 277 IPR025239 -
Pumo3g02876 277 SMART DUF4187_2 223 277 IPR025239 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02876 101 151 C2H2 Transcription Factor Family AT5G26610 43.137 1.93e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02876 - - gmx:100806249 434.491