Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02868 ATGGCTGAAGCCAAAACAACCCAAGACTATCTCCAACTCTTCATCCTCTGGCTCCTCTCCACCATCGCCGTCCGAGCCATCGTCACCAAACTCCGCCGCAAGCCCCGCCGTCCGCCGGGCCCACGCTCCCTCCCCGTCATCGGACACCTCCACCTCATCTCCGCCCTGCCCCACCAAACCTTCCACGCGCTCTCCGCGCGCTATGGTCCCATCATTAATATCTTCCTCGGCTCCATCCCATGCGTCGTCGTTTCGCGCCCCGAGCTCGCGAAAGAGTTCCTCAAGACGCACGAGCCCATCTTCTCGAACCGGTTCGTGAGCGCAGCGGTTCACCACCTGTCTTATGGGTGCAAGGGGTTCCTCTTCGCGCCCTACGGAAGCTACTGGAGGTTCCTGAAGAAGATCTGCATGTCGGAGCTTCTCGGTGCCCGCACCCTCGACCAGTTCCGCCATGTGAGGGAGCAAGAGACCATGAGGATTCTGCGCGTGTTGAGGGCGAAAGGGGAGGCGCGTGAGGCCGTTGACGTTAGCGGGGAGTTGATGACTTTAACGAACAGCATAATATCGAGGATGGTTTTGAGTCGAACATGTTGCGAGAGCGATGGTGACGTGGAGGATGTGAGGAAGATGGTGGAGGACACTGCTGAGCTGGCGGGGAAGTTCAACGTGGCGGATTTTGTGTGGTTTTGCAAGGGGTTAGACTTGCAAGGGATGAAGAAGAGGCTTGTGGAGATTTTGGAGAGGTTTGATGGCATGATGGAGAGGGTGATGAGGGAGCATGAGGAGGAGAGGGAGAGAAGGAAGGAAAGAGGGGAAGGGGAGAAGGTTGGGGATTTGCTTGATATTTTGTTGGAGATTCATGAGGATGAGAGCAGGGAGATGAAGATGAGTAGAGAGAATGTCAAGGCTTTTATCTTGGACATATTTATGGCAGGAACCGACACGTCAGCTATAACCATTGAGTGGGCCCTAGCTGAATTAATCAACAACCCACATGTGATGGAGAAAGCAAGAGAAGAGATCGATTCAGTGACAGAAAACAATAGACTAATACAAGAGTCAGATCTTGCCAACCTTCCATACCTGCAAGCCATAGTGAAAGAAACCCTAAGGCTTCACCCCACAGCGCCACTCTTAGGGAGAGAAGCATCAGAAAATTGCAACGTTTGTGGCTATGACATTCCAGCAAAGTCCCTAGTGTTTGTTAATCTGTGGTCTATGGGGAGGGACCCCAACCTGTGGGAGAACCCTCTTGAGTTCAGGCCAGAGAGGTTTATGGATGAAGAGAAAATTGATGTGAGGGGACAGCATTTCCAACTGATGCCATTTGGGACTGGGAGAAGGGTGTGTCCTGGTGCATCACTTGCACTTCAGGTTGTGCCCTCTAACCTTGCTGCTATGATTCAGTGCTTTGAATGGAAGGTTGATGGTGGGACTGTTAGCATGGAAGAGAAACCAGCCATGACACTTCCAAGGGCTCATCCTTTGGTTTGTGTCCCTGTGCCTCGCTTGTCCCTTTCATTCTAG 1527 0.5265 MAEAKTTQDYLQLFILWLLSTIAVRAIVTKLRRKPRRPPGPRSLPVIGHLHLISALPHQTFHALSARYGPIINIFLGSIPCVVVSRPELAKEFLKTHEPIFSNRFVSAAVHHLSYGCKGFLFAPYGSYWRFLKKICMSELLGARTLDQFRHVREQETMRILRVLRAKGEAREAVDVSGELMTLTNSIISRMVLSRTCCESDGDVEDVRKMVEDTAELAGKFNVADFVWFCKGLDLQGMKKRLVEILERFDGMMERVMREHEEERERRKERGEGEKVGDLLDILLEIHEDESREMKMSRENVKAFILDIFMAGTDTSAITIEWALAELINNPHVMEKAREEIDSVTENNRLIQESDLANLPYLQAIVKETLRLHPTAPLLGREASENCNVCGYDIPAKSLVFVNLWSMGRDPNLWENPLEFRPERFMDEEKIDVRGQHFQLMPFGTGRRVCPGASLALQVVPSNLAAMIQCFEWKVDGGTVSMEEKPAMTLPRAHPLVCVPVPRLSLSF 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02868 508 Coils Coil 334 354 - -
Pumo3g02868 508 Coils Coil 246 266 - -
Pumo3g02868 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Pumo3g02868 508 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 13 499 - -
Pumo3g02868 508 Gene3D Cytochrome P450 30 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g02868 508 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g02868 508 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g02868 508 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g02868 508 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g02868 508 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g02868 508 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g02868 508 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g02868 508 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g02868 508 CDD CYP93 69 500 - -
Pumo3g02868 508 Pfam Cytochrome P450 38 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g02868 508 SUPERFAMILY Cytochrome P450 31 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g02868 508 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g02868 508 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g02868 508 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g02868 508 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g02868 508 FunFam Cytochrome P450 family protein 29 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02868 Pumo-Chr3 49959346 49964498 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02868 10 503 Cytochrome P450 AT5G06900 50.000 5.08e-174 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02868 K24188 - gmx:100805931 841.262