Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02859 ATGAGTGTTTGCTTTTCTACTAGTCAATCTTCAATAAATGCTGTTGTCCTGAAAGGTCGTACTCCACTGCTGATGAGCAGTAACATTCATGGCCTTTGGTCCCGAGGAATATCCACTTCATTTTCTTCCAGTTTGTCTCCTGGGAAGCCAGAGATAAGTCATGTTGGTCTTTCTATTTGCACAAAATTGTCTTGTTCCACTGTTATGGGCCAAACAATTAGAGGAGGTTTCCTTGGATCATGTTGCTCCAAGCAAAAGGGCAATGCTCAATTCTTTAGTTCTGTAGTACCTCGGAAGAGGTATCATGAAATTTCATTGGCATGCCAAAGTATGAATATGAGGCTTTTGGTACCTAAACAAAAAATGCTGCACAAAGTTAAGTGTAAATTGGGACCAGTAAGTTGGCCGCAGGGATGTGCTTCAGTTGGCTTGATTTTTGGATTACTTGTATGTAACTCAAGTTCTGAACCTGCTCATGCTGAGTCACATTCTGAAAATGAAAATAGGAAAGATGACTGCAACGAGTATGAGTCAAATGTTAAATTCTCACATGGGAAGAAAGTTTATACTGACTATTCTGTAATTGGAATACCAGGGGATGGAAGATGCTTGTTCCGCTCTGTTGCTCGTGGGGCCTGTTTGAGGTCTGGAAAGTCCTCTCCAAGTGAAAGCACTCAGAGAGAGCTGGCAGATGATTTACGAGCCAGAGTTGCTGATGAGTTTATCAAAAGAAGGGACGAGACTGAATGGTTTGTTGAAGGTGATTTTGACACATATGTTTCACAAATAAGGAAGGCTCATGTGTGGGGAGGTGAACCAGAATTGTTCATTGCTTCACATGTTTTGCAGATGCCTATCACAGTATACATGTATGATCGAGATGCTGGTGGCTTGATATCAATTGCTGAGTATGGCCAAGAGTACGGCAAAGAAAACCCAATTAGAGTTCTCTACCATGGGTTTGGTCACTATGATGCATTAGAGATTCCTAAAAGGAAGGGTCCTAAGCCAAGACTGTAG 1020 0.4176 MSVCFSTSQSSINAVVLKGRTPLLMSSNIHGLWSRGISTSFSSSLSPGKPEISHVGLSICTKLSCSTVMGQTIRGGFLGSCCSKQKGNAQFFSSVVPRKRYHEISLACQSMNMRLLVPKQKMLHKVKCKLGPVSWPQGCASVGLIFGLLVCNSSSEPAHAESHSENENRKDDCNEYESNVKFSHGKKVYTDYSVIGIPGDGRCLFRSVARGACLRSGKSSPSESTQRELADDLRARVADEFIKRRDETEWFVEGDFDTYVSQIRKAHVWGGEPELFIASHVLQMPITVYMYDRDAGGLISIAEYGQEYGKENPIRVLYHGFGHYDALEIPKRKGPKPRL 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02859 339 Pfam OTU-like cysteine protease 198 324 IPR003323 -
Pumo3g02859 339 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 162 329 - -
Pumo3g02859 339 Gene3D - 173 334 - -
Pumo3g02859 339 ProSiteProfiles OTU domain profile. 192 330 IPR003323 -
Pumo3g02859 339 CDD OTU_plant_OTU4-like 191 327 - -
Pumo3g02859 339 FunFam OTU domain-containing protein 176 334 - -
Pumo3g02859 339 SUPERFAMILY Cysteine proteinases 191 327 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02859 Pumo-Chr3 49727540 49732987 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02859 - - gmx:100810338 639.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02859 3 49727540 49732987 Pumo3g02859 3 49727540 49732987 ECH
Pumo3g02859 3 49727540 49732987 Pumo5g03330 5 82435903 82443071 PCT