Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02850 ATGGTTAATAAGAACGATAATAAGAATAATGATAACAACAGCAGCATCAACGAAGAGAAGGAGAAAGACCTTGAGTTCTTGTTTGATCAGAACGATGAGGATGTTGAGCAAGACCAACAGGATATTGAAGCTGTGAAGTATGAGAGTGGGAGTAGCAGTGAAAGTGAGGATGAGGATGCAAATCGGAGAACACAGCCTGACTCTTTCTCTTCTCAGCAATGGCCTCAGAGTTACAAAGAGACAACAGATTCTTACACAATAGCTGCTGCTCCAAATTTTGAGTCAGTCCTGCGAGGGCCGAGTTTTATATATTCTAGTTTTGGCAATCGTTCAAAGAGTAGCTTAGACATCGATGGAAAGACACCTTTTCTATCTGCTTCGGAAGGCATTAGTCAATCAACTTGGTGGGAGAAAGCCTCAGTACAACGGCATTTTTCTGGAGAATTGCCCATTGGATATGGATGCACCTTCACTCAAACAGTTTTCAATGGCATTAATGTGATGGCTGGAGTTGGTCTTCTATCTACACCATATACAGTGAATCAAGCTGGGTGGATGAGCATGGCAGTGATGCTTCTTTTTGCAGTTATTTGTTGTTATACAGCCACCCTTATGAGATACTGCTTTGAAAGCAGAGAAGGAATCATTACCTACCCAGATATAGGAGAAGCTGCATTTGGAAGATATGGCCGTATTATTGTATCAATCATTTTGTACACTGAATTATATTCATATTGTGTGGAGTTCATCACCTTGGAAGGAGATAACCTCACTAGTCTGTTTCCTGGTACATCCTTAGATTTGGGTAGTTTCCAGTTAGACTCTATGCATTTGTTTGCAGTTTTGACAGCACTTATTATTCTCCCAACTGTTTGGTTGAAGGATCTTCGTATAATCTCGTATCTATCAGCTGGAGGAGTTGTTGCAACAATTTTGATTATTATTTGTGTGTTTTGTGTTGGGACAATAGACGGTGTTGGATTCCATCACACTGGTCAATTGGTAAAATGGAATGGCATTCCATTTGCTATTGGTGTCTATGGATTTTGCTTTGCAGGACATTCGGTTTTCCCAAATATTTACCAGTCTATGGCTGACAAGAAACAATTTACCAAAGCACTAATAATATGTTTTGTTTTGTGTGTTTTGATATATGGAGGCACTGCAATCATGGGATATCTCATGTTTGGTGATGGCACTTTGTCTCAGATAACATTGAATATGCCACCAGGCGCATTTGCTTCCAAAGTTGCATTGTGGACAACAGTGAGTTTTGAGATTTTTTTGGGTCTCTTAGCACTATTTTTATTTTTGTAG 1317 0.3956 MVNKNDNKNNDNNSSINEEKEKDLEFLFDQNDEDVEQDQQDIEAVKYESGSSSESEDEDANRRTQPDSFSSQQWPQSYKETTDSYTIAAAPNFESVLRGPSFIYSSFGNRSKSSLDIDGKTPFLSASEGISQSTWWEKASVQRHFSGELPIGYGCTFTQTVFNGINVMAGVGLLSTPYTVNQAGWMSMAVMLLFAVICCYTATLMRYCFESREGIITYPDIGEAAFGRYGRIIVSIILYTELYSYCVEFITLEGDNLTSLFPGTSLDLGSFQLDSMHLFAVLTALIILPTVWLKDLRIISYLSAGGVVATILIIICVFCVGTIDGVGFHHTGQLVKWNGIPFAIGVYGFCFAGHSVFPNIYQSMADKKQFTKALIICFVLCVLIYGGTAIMGYLMFGDGTLSQITLNMPPGAFASKVALWTTVSFEIFLGLLALFLFL 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02850 438 PANTHER OS05G0424000 PROTEIN-RELATED 160 425 - -
Pumo3g02850 438 MobiDBLite consensus disorder prediction 1 77 - -
Pumo3g02850 438 Pfam Transmembrane amino acid transporter protein 156 430 IPR013057 -
Pumo3g02850 438 MobiDBLite consensus disorder prediction 13 27 - -
Pumo3g02850 438 MobiDBLite consensus disorder prediction 50 64 - -
Pumo3g02850 438 Gene3D Amino acid/polyamine transporter I 154 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02850 Pumo-Chr3 49492326 49495993 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02850 6 423 Amino Acid or Auxin Permease AAAP Family AT2G41190 61.327 0.0 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02850 K15015 - gmx:100790344 742.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02850 3 49492326 49495993 Pumo3g02850 3 49492326 49495993 ECH