Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02844 ATGGGGAAGAAGAAGAAGAGAAGTAGGGTTTCCGAAGACGAGGAAATCGAATCTGACACTAACCCTTCCGATCAAAACGAAAACACTCTCTACCAGGTTCTTGGTGTGGAGAGAACAGCATCTCAACAGGAAATAAAGAAGGCATACTACAAGTTGGCATTGAGGCTGCATCCTGATAAGAACCCTGGTGATGAGGAAGCTAAAGCAAAGTTTCAGCAATTGCAAAATGTTATCGCAATTCTCGGGGATGAAGAAAAACGGGCTGTTTATGATCAGACTGGCTGTGTTGATGATGCTGAGCTTGCAGGGGATGTTGTTCAGAATCTTAAAGAATATTTCAGAGCAATGTACAAGAAGGTCACCGAAGCTGATATTGAGGAGTTTGAAGCAAACTATAGGGGATCTGACTCTGAGAAAAATGATTTGATTGATCTGTACAAGAAGTATAAGGGTAATATGAACAGGCTATTCTGTTCAATGCTTTGTTCAGATCCTAAACTTGACTCACACCGATTCAAGGATATTATTGATGAGGCTATAGCTGCTGGAGAACTAAAGGAAACAAAAGCCTACAAGAAATGGTCAAAGAAAATATCAGAAACCAAGCCACCAACTAGTCCCTTAAGAAGGCGGGCAAAATCATCAGATAAGCAATCAGAAAAAGATCTGTATGCTATCATATCACAACGTGGATCTGCGAGGAAAGACCGCTTTGATTCTATGTTCTCATCTCTAATTTCAAAGTATGGTGGGGGTCAAATGCCAGAACCCTCTGAAGAGGAATTTGAAGCTGCACAGAGAAAGGTGGAAAGCCGAAGGTCCTCAAAAAAGTCAAAGCGAAAATAA 846 0.4113 MGKKKKRSRVSEDEEIESDTNPSDQNENTLYQVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKAKFQQLQNVIAILGDEEKRAVYDQTGCVDDAELAGDVVQNLKEYFRAMYKKVTEADIEEFEANYRGSDSEKNDLIDLYKKYKGNMNRLFCSMLCSDPKLDSHRFKDIIDEAIAAGELKETKAYKKWSKKISETKPPTSPLRRRAKSSDKQSEKDLYAIISQRGSARKDRFDSMFSSLISKYGGGQMPEPSEEEFEAAQRKVESRRSSKKSKRK 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02844 281 SMART dnaj_3 28 86 IPR001623 -
Pumo3g02844 281 MobiDBLite consensus disorder prediction 194 220 - -
Pumo3g02844 281 Gene3D DnaJ domain 13 114 IPR036869 -
Pumo3g02844 281 PRINTS DnaJ domain signature 31 49 IPR001623 -
Pumo3g02844 281 PRINTS DnaJ domain signature 66 86 IPR001623 -
Pumo3g02844 281 PRINTS DnaJ domain signature 49 64 IPR001623 -
Pumo3g02844 281 PRINTS DnaJ domain signature 86 105 IPR001623 -
Pumo3g02844 281 CDD DnaJ 29 83 IPR001623 -
Pumo3g02844 281 Pfam DnaJ domain 30 91 IPR001623 -
Pumo3g02844 281 SUPERFAMILY Chaperone J-domain 28 100 IPR036869 -
Pumo3g02844 281 ProSiteProfiles dnaJ domain profile. 29 94 IPR001623 -
Pumo3g02844 281 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 18 281 IPR042977 -
Pumo3g02844 281 MobiDBLite consensus disorder prediction 1 16 - -
Pumo3g02844 281 MobiDBLite consensus disorder prediction 194 222 - -
Pumo3g02844 281 MobiDBLite consensus disorder prediction 249 281 - -
Pumo3g02844 281 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02844 Pumo-Chr3 49388572 49391723 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02844 31 91 C2H2 Transcription Factor Family AT1G74250 40.909 1.08e-08 53.9