Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02839 ATGGGGAAGAAGAAGAAGAGAAGTAGGGTTTCCGATGACGAGGAAATCGAATCTGACACTAACCCTTCCGATCAAAACGAAAACACTCTCTACCAGGTTCTTGGTGTGGAGAGAACAGCATCTCAACAGGAAATAAAGAAGGCATACTACAAGTTGGCATTGAGGCTGCATCCTGATAAGAACCCTGGTGATGAGGAAGCTAAAGCAAAGTTTCAGCAATTGCAAAATGTTATCGCAATTCTTGGGGATGAAGAAAAACGGGCTGTTTATGATCAGACTGGTTGTGTTGATGATGCTGAGCTTGCAGGGGATGTTGTTCAGAATCTTAAAGAATATTTCAGAGCAATGTACAAGAAGGTCACCGAAGCTGATATTGAGGAGTTTGAAGCAAACTATAGGGGATCTGACTCTGAGAAAAATGATTTGATTGATCTGTACAAGAAGTATAAGGGTAATATGAACAGGCTATTCTGTTCAATGCTTTGTTCAGATCCTAAACTTGACTCACACCGATTCAAGGATATTATTGATGAGGCTATAGCTGCTGGAGAACTAAAGGAAACAAAAGCCTACAAGAAATGGTCAAAGAAAATATCAGAAACCAAGCCACCAACTAGTCCCTTAAGAAGGCGGGCAAAATCATCAGATAAGCAATCAGAAAAAGATCTGTATGCTATCATATCACAACGTGGATCTGCGAGGAAAGACCGCTTTGATTCTATGTTCTCATCTCTAATTTCAAAGTATGGTGGGGGTCAAATGCCAGAACCCTCTGAAGAGGAATTTGAAGCTGCACAGAGAAAGGTGGAAAGCCGAAGGTCCTCAAAAAAGTCAAAGCGAAAATAA 846 0.409 MGKKKKRSRVSDDEEIESDTNPSDQNENTLYQVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKAKFQQLQNVIAILGDEEKRAVYDQTGCVDDAELAGDVVQNLKEYFRAMYKKVTEADIEEFEANYRGSDSEKNDLIDLYKKYKGNMNRLFCSMLCSDPKLDSHRFKDIIDEAIAAGELKETKAYKKWSKKISETKPPTSPLRRRAKSSDKQSEKDLYAIISQRGSARKDRFDSMFSSLISKYGGGQMPEPSEEEFEAAQRKVESRRSSKKSKRK 281
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02839 281 SMART dnaj_3 28 86 IPR001623 -
Pumo3g02839 281 MobiDBLite consensus disorder prediction 194 220 - -
Pumo3g02839 281 Gene3D DnaJ domain 13 114 IPR036869 -
Pumo3g02839 281 MobiDBLite consensus disorder prediction 1 29 - -
Pumo3g02839 281 PRINTS DnaJ domain signature 31 49 IPR001623 -
Pumo3g02839 281 PRINTS DnaJ domain signature 66 86 IPR001623 -
Pumo3g02839 281 PRINTS DnaJ domain signature 49 64 IPR001623 -
Pumo3g02839 281 PRINTS DnaJ domain signature 86 105 IPR001623 -
Pumo3g02839 281 CDD DnaJ 29 83 IPR001623 -
Pumo3g02839 281 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 18 281 IPR042977 -
Pumo3g02839 281 Pfam DnaJ domain 30 91 IPR001623 -
Pumo3g02839 281 SUPERFAMILY Chaperone J-domain 28 100 IPR036869 -
Pumo3g02839 281 ProSiteProfiles dnaJ domain profile. 29 94 IPR001623 -
Pumo3g02839 281 MobiDBLite consensus disorder prediction 1 16 - -
Pumo3g02839 281 MobiDBLite consensus disorder prediction 194 222 - -
Pumo3g02839 281 MobiDBLite consensus disorder prediction 249 281 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pumo3g02839 Pumo-Chr3 49247040 49250062 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02839 31 91 C2H2 Transcription Factor Family AT1G74250 40.909 1.01e-08 53.9