Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02833 ATGAGAGAACTTCGACCAGAGATTGAGAGACTTTTTGAAAGTAAAGCATGCATTGAAATGCGAGAAGCTGCAATGAATTTGACGAAGAGACTAGCTCAAACAGCCCAAGAAACCTTTATTGATTTTGAGGAAGCAGTTGAAAAAGATGCCACAAAAACTACTGTTATGGATGGAACTGTCCACCCTCGAACTAGCTATGTGATCAATTACGTGAAGTTTCTTTATGATTATCAATCAACTCTGAAACAACTCTTTCATGAGTTTGATCCTAATGACCCAGAAGCACAATTAGCTATTGTTACAACAAGGATTATGCAAGCTCTCCAAAGTAACTTGGATGGAAAATCAAAATAA 354 0.3701 MRELRPEIERLFESKACIEMREAAMNLTKRLAQTAQETFIDFEEAVEKDATKTTVMDGTVHPRTSYVINYVKFLYDYQSTLKQLFHEFDPNDPEAQLAIVTTRIMQALQSNLDGKSK 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02833 117 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 117 IPR004140 GO:0000145|GO:0006887
Pumo3g02833 117 Pfam Exo70 exocyst complex subunit 2 117 IPR046364 GO:0000145|GO:0005546|GO:0006887
Pumo3g02833 117 Gene3D Exocyst complex component Exo70 1 117 - -
Pumo3g02833 117 SUPERFAMILY Cullin repeat-like 1 117 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02833 Pumo-Chr3 49055564 49056752 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02833 1 117 EXO70 exocyst subunit family AT5G52340 78.632 6.84e-61 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02833 K07195 - gmx:100779774 226.098