Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02832 ATGTTCCAAATTCGAAGAGACACTCGTGCTACAGTCCTGGAACAGAGTCTTAGAAAGTTAGGTGTAGAAAGGCTAAGTAAAGATGATGTTCAAAAAATGCAATGGGAGGTTTTGGAGGCAAAGATTGGGAATTGGATTCATTACATGAGGATTGCTGTCAAATTGTTGATTTCTGGAGAGAAGAAAATTTGTGATCAAATATTTGATGATATGGACTCTTTGAAAGCTCAATGTTTTGCTGAAGTCACTGCTAGTAGTATGGCTATGCTTCTTAGTTTTGGAGAAGCTATTGCAAAAATGCAAGAGGTCACCTGA 315 0.3778 MFQIRRDTRATVLEQSLRKLGVERLSKDDVQKMQWEVLEAKIGNWIHYMRIAVKLLISGEKKICDQIFDDMDSLKAQCFAEVTASSMAMLLSFGEAIAKMQEVT 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02832 104 Pfam Exo70 exocyst complex subunit 44 100 IPR046364 GO:0000145|GO:0005546|GO:0006887
Pumo3g02832 104 Gene3D Exocyst complex component Exo70 1 104 - -
Pumo3g02832 104 PANTHER EXOCYST COMPLEX PROTEIN EXO70 2 99 IPR004140 GO:0000145|GO:0006887
Pumo3g02832 104 SUPERFAMILY Cullin repeat-like 6 98 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02832 Pumo-Chr3 49055142 49055529 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02832 1 99 EXO70 exocyst subunit family AT5G52340 78.788 4.24e-51 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02832 K07195 - gmx:100779774 184.882