Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02821 ATGAGAAAGATTGATTCTCTCCCCGTTAAAGAAGCATCTTTGGGGTGGCGTGTGTACTTCGATCTACAAGAGATGAAAGAGAAAATGGCACTCATCAAAGCTGTGATCTTAGACACTAAGCAAAAGAAGCCGCAGAGCAGTGCTTTGAGGGAATGGCTGGGACAGATCAAGCGCTTGTTCTCGGATGTCGAAAACATAGTCGATGATATTGAGTGTGAAGCATTGCGGAAGCACGTTGTCAAGCCTCATGGTAGCGTCTCAAGGAAGGTACGTCGTTTCTTCTCAACTAGTAATCCTCGCAATTATCGTCTTAGAATGTCACAAGAGATAAAGGACATCAAGGAGAGGTACGCCAAGGTTGCAGCTGACGGGCACCATTTTGGTCTTCAAATCATTGAGAATGATACACGCGTCGTGGATGTGGGAGAAATAACTCATTCACATGTAAACCCTTCAAAAGTGATAGGAAGGGAACATGATAAACAGGAAATACTAAAGCTTTTGTTGCAAGACGGTCATGACAAAAGTCTCTATGTTATTCCCATTGTGGGAATGGGAGGCTTGGGAAAGACCACACTTGCAAAGCTGGTATTCAATGATACCAGCATTGACGAATGTTTCCCATTGAAGATGTGGGTGTGTATCTCTAATGATTTTGAACTTAACAATGTGCTTATTAATATTCTCAAATCTGCTCCTAACCCAACTAAGGAAAATTTCGAGAGCTTTGAGAGCAAGCAACTTCAAAATCATTTGAGAAATATACTTCAATGTCAGAAATTCTTGCTTGTCTTGGACGACGTGTGGAACGAGGACCGTGCTAGATGGAATGAATTGAAGGAAATAATAGATGTAGGTGTTGAAGGGAGTAAAATACTGGTGACTACTCGTAGTCACTCAATAGCTGGCATGATGCAGACTAAGTTCTCTAACTCTTACCTTCTAGAAGGCCTCTCTGAGGAGGATTCATTCTCTCTGTTTGTCAAATTGGCTTTTGAAGAAGGAGAAGAGAATAAACATCCACAATTGTTGGAGATTGGGAGAGAAATTGTGAAAAAATGTGGAGGGATACCGTTGGCGGTGAAAACATTAGGGAGTTCACTATTCTCAAGGGTTGATAGAAAAGAGTGGGACACTGTAAGAGATAATGCTATTTGGAATTTACCACAAAAAGAAAAAGACATTTTGCCTGCTCTCCAATTAAGTTATGATCGACTGCCTTCATATTTAAAACCATGCTTTGCTTGCTTCTCTCTTTTCCCTGAGGACTACGAGTTTAGTAGTTTTGATGTTACTATGTTGTGGGAGGCACTTGGTTTTCTTCCACCTTGTAAGAAAAGTGAAACAAAGAATGATGTTGCCAAACAATTTTTGCGTGAGCTACTGTCAAGATCTTTTCTTACAGATTTTCTTGACTTGGGCAGTACTTGCACTTTTAAATTACATAATTTAGTGTGTGATCTTGCAGTTTATGTTGCAGAAGAGGAGTTTCAAACAATATATCCCAGCGGTCCCAAAATATCTGAGCATGCCCAACATTTGCGATTCATGGAAAATAATTTGCTTGGCGAAGCACTCCTTCCCTCAGGTATCAGAACTATAATTTTTCCTCAAGAAGCCACTGATGAAGCTTTCTTAAATGCATTGGTGTCAAGGTGCAAATACTTGAGGGTTTTAGAAATAATTTATTCTGAATACGAGAGTTTGCCTCGCGACATTGGAAAGTTGAAACATTTAAGATATCTCTGTCTTGAGGGTAATAAAAAACTTAAGAGACTCCCTGATTCAGTGTGCAAACTCCAAAGTTTGCAAACTTTGGACCTCGCTGGATGCACAGAGCTACAAGAATTGCCCAAAGGAATAAGTAAACTAATCAGCCTTCGTCAGCTGCTTATAACCACAAGGCAACCTGATTTTCCAGAAAAAGAAATTGCAAATTTGACTTCATTGGAAGATTTAAGATTCTATGATTGTGATAAGTTGGAATCATTGTTAGAAGGGATACAACTTTCTAGTCTTAAAACATTGGCTTTTAATCGCTGTGGGAGTCTAAAGTCTTTGTCATTTCATGTCATTAGAAATTTAGAGAACTTTGCTATTAACGAATGTGAAAAGTTGGAATTGTCAATGGGCCTTGGCAACCTAAGCCCCGATTCACGGTTAAAGTCAGTTACTCTTGAGCGTTTGCCACAGTTGGTCACTTTACCTAAATGGTTGCAAGGATCTATGAAAACATTAGGTTCCTTGGTAATTAATGGTTGCAAGAATCTTGAGGAGCTTCCTGAGTGGCTGTCAACTCTGATTTGTCTCAAACTGCTTAAAATTTGTTATTGTCCAAAGCTGCTTTTCTTCCATAATAACATGCATCACCTCACAAATCTTGAATATTTAGAAATTAAAGTTGGTCTGGTCACTTTGCCTCAGTGGTTGCAAGGATCTGTGAACACTTTACATTCCCTGACTATTGATGGCTGCATCAATCTTGAGGAGCTTCCAGAGTGGCTGCCAACTCTGATTTGTCTCAAAGTACTTCAAATTATCGATTGTCCAAAATTGTTGTCACTCCCAGATAACATGCATCACCTCACAAACCTTGAACGTTTAGAAATTCATGGATGTCCTGAATTATGCCAAAGATGTCAGCCAGAAGTTGGACAGGATTGGCACAAGATATCACTCATCAAACAAGTTTTCATTGATGAATTGGAAGAGGAAGAGGAATTCTCAGTATAA 2733 0.3952 MRKIDSLPVKEASLGWRVYFDLQEMKEKMALIKAVILDTKQKKPQSSALREWLGQIKRLFSDVENIVDDIECEALRKHVVKPHGSVSRKVRRFFSTSNPRNYRLRMSQEIKDIKERYAKVAADGHHFGLQIIENDTRVVDVGEITHSHVNPSKVIGREHDKQEILKLLLQDGHDKSLYVIPIVGMGGLGKTTLAKLVFNDTSIDECFPLKMWVCISNDFELNNVLINILKSAPNPTKENFESFESKQLQNHLRNILQCQKFLLVLDDVWNEDRARWNELKEIIDVGVEGSKILVTTRSHSIAGMMQTKFSNSYLLEGLSEEDSFSLFVKLAFEEGEENKHPQLLEIGREIVKKCGGIPLAVKTLGSSLFSRVDRKEWDTVRDNAIWNLPQKEKDILPALQLSYDRLPSYLKPCFACFSLFPEDYEFSSFDVTMLWEALGFLPPCKKSETKNDVAKQFLRELLSRSFLTDFLDLGSTCTFKLHNLVCDLAVYVAEEEFQTIYPSGPKISEHAQHLRFMENNLLGEALLPSGIRTIIFPQEATDEAFLNALVSRCKYLRVLEIIYSEYESLPRDIGKLKHLRYLCLEGNKKLKRLPDSVCKLQSLQTLDLAGCTELQELPKGISKLISLRQLLITTRQPDFPEKEIANLTSLEDLRFYDCDKLESLLEGIQLSSLKTLAFNRCGSLKSLSFHVIRNLENFAINECEKLELSMGLGNLSPDSRLKSVTLERLPQLVTLPKWLQGSMKTLGSLVINGCKNLEELPEWLSTLICLKLLKICYCPKLLFFHNNMHHLTNLEYLEIKVGLVTLPQWLQGSVNTLHSLTIDGCINLEELPEWLPTLICLKVLQIIDCPKLLSLPDNMHHLTNLERLEIHGCPELCQRCQPEVGQDWHKISLIKQVFIDELEEEEEFSV 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02821 910 Gene3D - 317 407 IPR042197 -
Pumo3g02821 910 Gene3D Ribonuclease Inhibitor 510 889 IPR032675 -
Pumo3g02821 910 PANTHER DISEASE RESISTANCE PROTEIN RP 24 810 IPR044974 GO:0006952
Pumo3g02821 910 Pfam NB-ARC domain 158 404 IPR002182 GO:0043531
Pumo3g02821 910 Pfam Rx N-terminal domain 2 86 IPR041118 -
Pumo3g02821 910 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 138 416 IPR027417 -
Pumo3g02821 910 Gene3D - 140 311 IPR027417 -
Pumo3g02821 910 FunFam Probable disease resistance protein At1g61300 138 309 - -
Pumo3g02821 910 Gene3D - 409 490 IPR036388 -
Pumo3g02821 910 PRINTS Disease resistance protein signature 354 368 - -
Pumo3g02821 910 PRINTS Disease resistance protein signature 598 614 - -
Pumo3g02821 910 PRINTS Disease resistance protein signature 255 269 - -
Pumo3g02821 910 PRINTS Disease resistance protein signature 179 194 - -
Pumo3g02821 910 SUPERFAMILY L domain-like 481 902 - -
Pumo3g02821 910 Gene3D - 1 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02821 Pumo-Chr3 48484955 48487903 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02821 180 831 WRKY Transcription Factor Family AT5G45050 22.365 4.98e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02821 - - gmx:100780033 1108.98