Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02814 ATGCTTGGACAAGAGAATTGTCTCCTTAGATCACCATTTTTGCTATGTATCTTCATTGGCTTCTTGATGATGCATTCTGTTGTGGGAGCTGAGATTCCATTGGGTTCCAAGCTTTCTGTGGTTGACAATGATTATTGGGTTTCCTCCAATGGTGATTTTGCATTTGGATTCTTCAACATTTCAGATCAACCTAACCAGTTTAGTGTTGGCATTAGATTCAATTCCAAGTCTATACCATACAGCCAACAAACTGTGGTTTGGGTTGCTGGTGGTGATGTCAAAGTAGGTAACAAATCCTACTTTGAACTCACTCTGCAAGGGGAACTGGTCCTGTTTGATTCCTTACGCGAGGGTTCTGTTTGGACCATCGAAACGGGAAACCGATCTGTAGCTTCAGCTTCACTTCTTGACAATGGAAATCTTGTTCTAATGGACAAGGAGCAAAAGATCATTTGGCAGAGTTTTGATACTCCATCTGATACTCTTCTCCCAGGACAAAGTTTAGTTGCTAATGAAATGCTTCGGGCTGCCACCGCAAGCAAGAATAGCAAGGCCAGTTATTATACTCTTCACATGAATGCTTCAGGCCATTTGGAGCTACATTGGGAAAGTGGTGTTATCTACTGGACAAGTGAAAACCCTTCTGCTTCAAATCTCAGTGCTTTCCTTACAACCAGTGGAGCTCTAGAACTTCGAGACCGAAGCTTGAAACCTGTTTGGTCTGCATTTGGAGATGATCACAATGATTCTGTGAAATACAGATATCTTCGGCTCGATGTGGATGGCAATCTTCGGTTATATTCGTGGGTTGAAAGTTTAGGATCGTGGAGATCGGTCTGGCAAGCTGTTGAGAATCAGTGCAAGGTCTTTGCAACTTGTGGTCAACTTGGTGTCTGCGTGTTCAACGCCTCAGGTTCTGCTGAATGCAAGTGCCCATTTGAGGTAACTGGGGATAACAAATGTTTGGTTCCATATGAAGGGGAGTGTGAATCTGGCTCCAATATGATAGCATATAAGAACACATATCTATATGCATTCTACCCTCCTGATAATTCTTTTATTACAAGTAGTATGCAGCATTGTGAACAGTTGTGCCTGAATGACACTCAATGTACAGTTGCAACCTTTTCCAATGATGGAACTCTACAATGCTCAATAAAGAAAACTGGGTATGTCACTGGCTATTCAGATCCATCTGTAAGCTCAATATCATTTGTTAAGAGATGTTCAGGTCCATTTGCTGTAAATCCAGGAGCTGCCACAGGCACATTTTTCATCTTTGTTATTCTCCAGCTGGGAGTTGGGTTCTTCATCTACAGAAGAAAAAACTCTACCAGGAAAAAGTCCACTTTAGCCTTCACAGGCACAAACTCAAAGGGTTTAATTGTGTTGTCCTTCTCAGAAATCAAGAGCCTCACAGGGGATTTCAAGAATCAAATTGGGCCAAAGGTGTTCAAGGGTTTGCTACCAAACAATCACCCGATTGCAGTTAAAGACCTGAATGCGTCCATAGAGGAAAGGAAGTTCCGAAGTGCTGTTATGAAGATGGGTTGCATCCACCACAAGAACCTTGTGAAACTGGAGGGTTATTGTTGTGAGTTTGATCACAGGTTTTTGGTGTATGAATATTGCAAAAAGGGTTCAGTGGACAAGTACATAGATGATGCAGCTCTTTGCAGGATGCTAACATGGAGAAAGAGAGTTGAGATATGCTCAAGTGTGGCAAAGGCCATATGCTATTTGCACTCTGGGTGCAGGGAGTTTATAAGCCATGGAAACTTGAAATGTGAAAATGTTATGTTGGATGACACCTTAGGGGCCAAGGTGACTGAATTTGGGTTTGCTATCGCAGATGGCAAGGCAACATATTGTGGCTTTTCAGCTGAGAAGGATGTAGAGGATTTTGGCAAGTTAGTTCTAACCTTGTTAACCGGGTGTCGCGATCACGATCATGTTGAACTTTGCGAGTGGGCGTATAAAGAATGGATGGAAGAGAGGGTGGCCAATGTGGTTGATAAAAGAATGGAAGGGGGTTACAATTCGGAGGAACTGGAGCGTGTGTTAAGAATTGCGTTTTGGTGCCTTCAAATGGACGAACGTCGGAGACCTTCCATGGGGGAGGTAGTAAGAGTACTTGATGGAACATTGAGTGTTGATCCCCCGCCACATCCTTTCTCCTTTCAGAGGCCCTTGCAGGTAGATGATTCAGAAGAAAATGTTTCAGAATTAGAAGTATAG 2238 0.4294 MLGQENCLLRSPFLLCIFIGFLMMHSVVGAEIPLGSKLSVVDNDYWVSSNGDFAFGFFNISDQPNQFSVGIRFNSKSIPYSQQTVVWVAGGDVKVGNKSYFELTLQGELVLFDSLREGSVWTIETGNRSVASASLLDNGNLVLMDKEQKIIWQSFDTPSDTLLPGQSLVANEMLRAATASKNSKASYYTLHMNASGHLELHWESGVIYWTSENPSASNLSAFLTTSGALELRDRSLKPVWSAFGDDHNDSVKYRYLRLDVDGNLRLYSWVESLGSWRSVWQAVENQCKVFATCGQLGVCVFNASGSAECKCPFEVTGDNKCLVPYEGECESGSNMIAYKNTYLYAFYPPDNSFITSSMQHCEQLCLNDTQCTVATFSNDGTLQCSIKKTGYVTGYSDPSVSSISFVKRCSGPFAVNPGAATGTFFIFVILQLGVGFFIYRRKNSTRKKSTLAFTGTNSKGLIVLSFSEIKSLTGDFKNQIGPKVFKGLLPNNHPIAVKDLNASIEERKFRSAVMKMGCIHHKNLVKLEGYCCEFDHRFLVYEYCKKGSVDKYIDDAALCRMLTWRKRVEICSSVAKAICYLHSGCREFISHGNLKCENVMLDDTLGAKVTEFGFAIADGKATYCGFSAEKDVEDFGKLVLTLLTGCRDHDHVELCEWAYKEWMEERVANVVDKRMEGGYNSEELERVLRIAFWCLQMDERRRPSMGEVVRVLDGTLSVDPPPHPFSFQRPLQVDDSEENVSELEV 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02814 745 Gene3D - 29 157 IPR036426 -
Pumo3g02814 745 ProSiteProfiles PAN/Apple domain profile. 329 409 IPR003609 -
Pumo3g02814 745 Pfam Protein tyrosine and serine/threonine kinase 484 617 IPR001245 GO:0004672|GO:0006468
Pumo3g02814 745 PANTHER OS07G0415500 PROTEIN 13 725 - -
Pumo3g02814 745 Pfam PAN domain 339 398 IPR003609 -
Pumo3g02814 745 SMART serkin_6 474 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g02814 745 Pfam D-mannose binding lectin 84 173 IPR001480 -
Pumo3g02814 745 CDD B_lectin 47 158 IPR001480 -
Pumo3g02814 745 SMART blect_4 37 158 IPR001480 -
Pumo3g02814 745 Gene3D Phosphorylase Kinase; domain 1 437 543 - -
Pumo3g02814 745 PIRSF SRK 620 744 IPR024171 GO:0004674
Pumo3g02814 745 PIRSF SRK 5 623 IPR024171 GO:0004674
Pumo3g02814 745 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 28 157 - -
Pumo3g02814 745 SUPERFAMILY Protein kinase-like (PK-like) 463 712 IPR011009 -
Pumo3g02814 745 SMART ntp_6 330 408 IPR003609 -
Pumo3g02814 745 SUPERFAMILY alpha-D-mannose-specific plant lectins 185 278 IPR036426 -
Pumo3g02814 745 ProSiteProfiles Bulb-type lectin domain profile. 31 156 IPR001480 -
Pumo3g02814 745 Gene3D Transferase(Phosphotransferase) domain 1 544 622 - -
Pumo3g02814 745 Gene3D Transferase(Phosphotransferase) domain 1 623 721 - -
Pumo3g02814 745 Gene3D - 158 273 IPR036426 -
Pumo3g02814 745 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 158 278 - -
Pumo3g02814 745 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 544 622 - -
Pumo3g02814 745 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 440 543 - -
Pumo3g02814 745 ProSiteProfiles Bulb-type lectin domain profile. 159 279 IPR001480 -
Pumo3g02814 745 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 211 IPR036426 -
Pumo3g02814 745 ProSiteProfiles EGF-like domain profile. 283 322 IPR000742 -
Pumo3g02814 745 Pfam S-locus glycoprotein domain 248 311 IPR000858 GO:0048544
Pumo3g02814 745 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 623 720 - -
Pumo3g02814 745 ProSiteProfiles Protein kinase domain profile. 448 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02814 Pumo-Chr3 48056379 48059145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02814 429 729 Receptor kinase-like Gene Family AT3G45860 29.446 7.55e-40 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pumo3g02814 PK_Tyr_Ser-Thr 2.5e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02814 - - gmx:100815678 1428.31