Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02797 ATGACAGCTCTGAATAAGTGTTTGAAAAAAGACATTATTTCAGCAAATCAAGCATCTTCAAAAGCGGTGGAGGCGCCAAAGGGCTATCTTGCAGTCTATGTTGGAGAGAAAATGAAGCGGTTTGTGATCCCTGTAGCATACTTGAACCAACCTTTATTCCAGGACTTGTTGAGTCAAGCTGAGGAAGAGTTTGGATATGATCATCCCATGGGTGGCCTCACAATTCCTTGCAGCGAAGATGTCTTCCAACGTATAACTTCTTGCTTGAATTGA 273 0.4249 MTALNKCLKKDIISANQASSKAVEAPKGYLAVYVGEKMKRFVIPVAYLNQPLFQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQRITSCLN 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02797 90 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 13 89 IPR003676 GO:0009733
Pumo3g02797 90 Pfam Auxin responsive protein 11 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02797 Pumo-Chr3 47496699 47497508 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02797 17 89 Calmodulin-binding Proteins AT3G43120 47.945 2.91e-21 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02797 K14488 - gmx:100820621 152.525