Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02796 ATGGGATTCCACATACCAAGAATGATTAGGCGGGCTTCGTTTTCTACAACCCAAGCAGCCTCCAAGGGGGTAGAAGTACCAAAAGGCTATCTTGCAGTCTATGTTGGAGATAAGATGAGACGGTTCATGATTCCAATATCATACTTGAACCAACCGTCATTTCAAGAATTACTTAGTCAAGCAGAAGAAGAATTTGGATATAATCATCCAACAGGTGGTCTAACAATACCATGCAAGGAGGATGAGTTCCTAAATATCACCTCTCAGTTGAATGAGCAGTAA 282 0.4113 MGFHIPRMIRRASFSTTQAASKGVEVPKGYLAVYVGDKMRRFMIPISYLNQPSFQELLSQAEEEFGYNHPTGGLTIPCKEDEFLNITSQLNEQ 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02796 93 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 13 90 IPR003676 GO:0009733
Pumo3g02796 93 Pfam Auxin responsive protein 11 88 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02796 Pumo-Chr3 47495956 47496284 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02796 15 83 Calmodulin-binding Proteins AT3G43120 50.725 7.96e-20 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02796 - K14488 gmx:100786095 169.088